Protein–RNA interactions for Protein: Q9D9Y8

Ssmem1, RIKEN cDNA 1700025E21, isoform CRA_b, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssmem1Q9D9Y8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssmem1Q9D9Y8 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssmem1Q9D9Y8 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssmem1Q9D9Y8 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssmem1Q9D9Y8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC17.38■□□□□ 0.37
Ssmem1Q9D9Y8 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssmem1Q9D9Y8 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Ssmem1Q9D9Y8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssmem1Q9D9Y8 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssmem1Q9D9Y8 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssmem1Q9D9Y8 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ssmem1Q9D9Y8 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssmem1Q9D9Y8 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssmem1Q9D9Y8 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssmem1Q9D9Y8 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
Ssmem1Q9D9Y8 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.37■□□□□ 0.37
Ssmem1Q9D9Y8 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.37■□□□□ 0.37
Ssmem1Q9D9Y8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssmem1Q9D9Y8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Ssmem1Q9D9Y8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssmem1Q9D9Y8 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.37■□□□□ 0.37
Ssmem1Q9D9Y8 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Ssmem1Q9D9Y8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ssmem1Q9D9Y8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssmem1Q9D9Y8 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssmem1Q9D9Y8 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17.36■□□□□ 0.37
Ssmem1Q9D9Y8 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Ssmem1Q9D9Y8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Ssmem1Q9D9Y8 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Ssmem1Q9D9Y8 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Ssmem1Q9D9Y8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssmem1Q9D9Y8 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssmem1Q9D9Y8 Gm43137-201ENSMUST00000198052 594 ntBASIC17.35■□□□□ 0.37
Ssmem1Q9D9Y8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Ssmem1Q9D9Y8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssmem1Q9D9Y8 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssmem1Q9D9Y8 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssmem1Q9D9Y8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ssmem1Q9D9Y8 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssmem1Q9D9Y8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssmem1Q9D9Y8 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.34■□□□□ 0.37
Ssmem1Q9D9Y8 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Ssmem1Q9D9Y8 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssmem1Q9D9Y8 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssmem1Q9D9Y8 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Ssmem1Q9D9Y8 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ssmem1Q9D9Y8 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ssmem1Q9D9Y8 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Ssmem1Q9D9Y8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssmem1Q9D9Y8 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ssmem1Q9D9Y8 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC17.33■□□□□ 0.36
Ssmem1Q9D9Y8 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC17.33■□□□□ 0.36
Ssmem1Q9D9Y8 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Ssmem1Q9D9Y8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC17.33■□□□□ 0.36
Ssmem1Q9D9Y8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssmem1Q9D9Y8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssmem1Q9D9Y8 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ssmem1Q9D9Y8 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ssmem1Q9D9Y8 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Ssmem1Q9D9Y8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.32■□□□□ 0.36
Ssmem1Q9D9Y8 Mir6236-201ENSMUST00000184437 123 ntBASIC17.32■□□□□ 0.36
Ssmem1Q9D9Y8 Gm45417-201ENSMUST00000209533 758 ntBASIC17.32■□□□□ 0.36
Ssmem1Q9D9Y8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
Ssmem1Q9D9Y8 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssmem1Q9D9Y8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ssmem1Q9D9Y8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ssmem1Q9D9Y8 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssmem1Q9D9Y8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssmem1Q9D9Y8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssmem1Q9D9Y8 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC17.32■□□□□ 0.36
Ssmem1Q9D9Y8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssmem1Q9D9Y8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ssmem1Q9D9Y8 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ssmem1Q9D9Y8 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ssmem1Q9D9Y8 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssmem1Q9D9Y8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.31■□□□□ 0.36
Ssmem1Q9D9Y8 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.31■□□□□ 0.36
Ssmem1Q9D9Y8 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ssmem1Q9D9Y8 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssmem1Q9D9Y8 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssmem1Q9D9Y8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssmem1Q9D9Y8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssmem1Q9D9Y8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ssmem1Q9D9Y8 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ssmem1Q9D9Y8 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Ssmem1Q9D9Y8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Ssmem1Q9D9Y8 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssmem1Q9D9Y8 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ssmem1Q9D9Y8 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssmem1Q9D9Y8 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssmem1Q9D9Y8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssmem1Q9D9Y8 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssmem1Q9D9Y8 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC17.3■□□□□ 0.36
Ssmem1Q9D9Y8 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssmem1Q9D9Y8 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssmem1Q9D9Y8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ssmem1Q9D9Y8 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssmem1Q9D9Y8 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssmem1Q9D9Y8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ssmem1Q9D9Y8 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms