Protein–RNA interactions for Protein: Q9D9P8

Llcfc1, LLLL and CFNLAS motif-containing protein 1, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Llcfc1Q9D9P8 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Llcfc1Q9D9P8 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.24■□□□□ 0.99
Llcfc1Q9D9P8 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Llcfc1Q9D9P8 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Llcfc1Q9D9P8 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Llcfc1Q9D9P8 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Llcfc1Q9D9P8 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Llcfc1Q9D9P8 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Llcfc1Q9D9P8 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Llcfc1Q9D9P8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
Llcfc1Q9D9P8 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Llcfc1Q9D9P8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Llcfc1Q9D9P8 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Llcfc1Q9D9P8 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Llcfc1Q9D9P8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Llcfc1Q9D9P8 Gm10616-201ENSMUST00000205285 2127 ntBASIC21.22■□□□□ 0.99
Llcfc1Q9D9P8 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Llcfc1Q9D9P8 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Llcfc1Q9D9P8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Llcfc1Q9D9P8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Llcfc1Q9D9P8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Llcfc1Q9D9P8 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Llcfc1Q9D9P8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Llcfc1Q9D9P8 Gm7143-201ENSMUST00000222811 859 ntBASIC21.21■□□□□ 0.99
Llcfc1Q9D9P8 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Llcfc1Q9D9P8 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
Llcfc1Q9D9P8 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Llcfc1Q9D9P8 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Llcfc1Q9D9P8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Llcfc1Q9D9P8 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Llcfc1Q9D9P8 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Llcfc1Q9D9P8 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Llcfc1Q9D9P8 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Llcfc1Q9D9P8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Llcfc1Q9D9P8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.2■□□□□ 0.98
Llcfc1Q9D9P8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC21.2■□□□□ 0.98
Llcfc1Q9D9P8 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Llcfc1Q9D9P8 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Llcfc1Q9D9P8 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Llcfc1Q9D9P8 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Llcfc1Q9D9P8 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Llcfc1Q9D9P8 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Llcfc1Q9D9P8 Golph3-202ENSMUST00000226517 2359 ntBASIC21.19■□□□□ 0.98
Llcfc1Q9D9P8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Llcfc1Q9D9P8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Llcfc1Q9D9P8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC21.18■□□□□ 0.98
Llcfc1Q9D9P8 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Llcfc1Q9D9P8 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Llcfc1Q9D9P8 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Llcfc1Q9D9P8 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Llcfc1Q9D9P8 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Llcfc1Q9D9P8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Llcfc1Q9D9P8 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Llcfc1Q9D9P8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Llcfc1Q9D9P8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Llcfc1Q9D9P8 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Llcfc1Q9D9P8 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Llcfc1Q9D9P8 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.17■□□□□ 0.98
Llcfc1Q9D9P8 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Llcfc1Q9D9P8 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Llcfc1Q9D9P8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Llcfc1Q9D9P8 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Llcfc1Q9D9P8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Llcfc1Q9D9P8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Llcfc1Q9D9P8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Llcfc1Q9D9P8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Llcfc1Q9D9P8 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Llcfc1Q9D9P8 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Llcfc1Q9D9P8 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Llcfc1Q9D9P8 Gm43909-201ENSMUST00000203443 1876 ntBASIC21.14■□□□□ 0.97
Llcfc1Q9D9P8 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.14■□□□□ 0.97
Llcfc1Q9D9P8 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Llcfc1Q9D9P8 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Llcfc1Q9D9P8 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Llcfc1Q9D9P8 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Llcfc1Q9D9P8 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
Llcfc1Q9D9P8 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC21.14■□□□□ 0.97
Llcfc1Q9D9P8 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Llcfc1Q9D9P8 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC21.14■□□□□ 0.97
Llcfc1Q9D9P8 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Llcfc1Q9D9P8 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Llcfc1Q9D9P8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Llcfc1Q9D9P8 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Llcfc1Q9D9P8 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Llcfc1Q9D9P8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Llcfc1Q9D9P8 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Llcfc1Q9D9P8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Llcfc1Q9D9P8 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC21.13■□□□□ 0.97
Llcfc1Q9D9P8 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Llcfc1Q9D9P8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC21.12■□□□□ 0.97
Llcfc1Q9D9P8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Llcfc1Q9D9P8 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.12■□□□□ 0.97
Llcfc1Q9D9P8 Gm40881-201ENSMUST00000223397 166 ntBASIC21.12■□□□□ 0.97
Llcfc1Q9D9P8 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Llcfc1Q9D9P8 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
Llcfc1Q9D9P8 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.12■□□□□ 0.97
Llcfc1Q9D9P8 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Llcfc1Q9D9P8 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Llcfc1Q9D9P8 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Llcfc1Q9D9P8 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms