Protein–RNA interactions for Protein: Q9D9M9

Rnf138rt1, RIKEN cDNA 1700045I19, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf138rt1Q9D9M9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf138rt1Q9D9M9 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf138rt1Q9D9M9 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf138rt1Q9D9M9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf138rt1Q9D9M9 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rnf138rt1Q9D9M9 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.27■■□□□ 1
Rnf138rt1Q9D9M9 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf138rt1Q9D9M9 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.27■■□□□ 1
Rnf138rt1Q9D9M9 Gm27454-201ENSMUST00000185090 204 ntBASIC21.27■■□□□ 1
Rnf138rt1Q9D9M9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rnf138rt1Q9D9M9 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
Rnf138rt1Q9D9M9 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Rnf138rt1Q9D9M9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf138rt1Q9D9M9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf138rt1Q9D9M9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf138rt1Q9D9M9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf138rt1Q9D9M9 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf138rt1Q9D9M9 Gm43137-201ENSMUST00000198052 594 ntBASIC21.26■□□□□ 0.99
Rnf138rt1Q9D9M9 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC21.26■□□□□ 0.99
Rnf138rt1Q9D9M9 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.26■□□□□ 0.99
Rnf138rt1Q9D9M9 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf138rt1Q9D9M9 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf138rt1Q9D9M9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Rnf138rt1Q9D9M9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf138rt1Q9D9M9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf138rt1Q9D9M9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Rnf138rt1Q9D9M9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf138rt1Q9D9M9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
Rnf138rt1Q9D9M9 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Rnf138rt1Q9D9M9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC21.25■□□□□ 0.99
Rnf138rt1Q9D9M9 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC21.25■□□□□ 0.99
Rnf138rt1Q9D9M9 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC21.25■□□□□ 0.99
Rnf138rt1Q9D9M9 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf138rt1Q9D9M9 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC21.25■□□□□ 0.99
Rnf138rt1Q9D9M9 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.25■□□□□ 0.99
Rnf138rt1Q9D9M9 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Rnf138rt1Q9D9M9 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
Rnf138rt1Q9D9M9 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC21.25■□□□□ 0.99
Rnf138rt1Q9D9M9 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rnf138rt1Q9D9M9 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
Rnf138rt1Q9D9M9 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Rnf138rt1Q9D9M9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf138rt1Q9D9M9 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.24■□□□□ 0.99
Rnf138rt1Q9D9M9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Rnf138rt1Q9D9M9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf138rt1Q9D9M9 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf138rt1Q9D9M9 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
Rnf138rt1Q9D9M9 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf138rt1Q9D9M9 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf138rt1Q9D9M9 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf138rt1Q9D9M9 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rnf138rt1Q9D9M9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.24■□□□□ 0.99
Rnf138rt1Q9D9M9 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf138rt1Q9D9M9 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.23■□□□□ 0.99
Rnf138rt1Q9D9M9 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rnf138rt1Q9D9M9 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf138rt1Q9D9M9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf138rt1Q9D9M9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
Rnf138rt1Q9D9M9 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Rnf138rt1Q9D9M9 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf138rt1Q9D9M9 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
Rnf138rt1Q9D9M9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf138rt1Q9D9M9 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf138rt1Q9D9M9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf138rt1Q9D9M9 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf138rt1Q9D9M9 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf138rt1Q9D9M9 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf138rt1Q9D9M9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rnf138rt1Q9D9M9 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf138rt1Q9D9M9 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf138rt1Q9D9M9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf138rt1Q9D9M9 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rnf138rt1Q9D9M9 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Rnf138rt1Q9D9M9 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf138rt1Q9D9M9 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC21.2■□□□□ 0.98
Rnf138rt1Q9D9M9 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf138rt1Q9D9M9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf138rt1Q9D9M9 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rnf138rt1Q9D9M9 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Rnf138rt1Q9D9M9 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf138rt1Q9D9M9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Rnf138rt1Q9D9M9 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf138rt1Q9D9M9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Rnf138rt1Q9D9M9 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.19■□□□□ 0.98
Rnf138rt1Q9D9M9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf138rt1Q9D9M9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf138rt1Q9D9M9 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rnf138rt1Q9D9M9 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf138rt1Q9D9M9 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf138rt1Q9D9M9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf138rt1Q9D9M9 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf138rt1Q9D9M9 Spcs1-204ENSMUST00000226782 949 ntBASIC21.18■□□□□ 0.98
Rnf138rt1Q9D9M9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf138rt1Q9D9M9 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rnf138rt1Q9D9M9 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf138rt1Q9D9M9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC21.17■□□□□ 0.98
Rnf138rt1Q9D9M9 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.17■□□□□ 0.98
Rnf138rt1Q9D9M9 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf138rt1Q9D9M9 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rnf138rt1Q9D9M9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms