Protein–RNA interactions for Protein: Q9D2N9

Vps33a, Vacuolar protein sorting-associated protein 33A, mousemouse

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps33aQ9D2N9 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC21.37■■□□□ 1.01
Vps33aQ9D2N9 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
Vps33aQ9D2N9 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.37■■□□□ 1.01
Vps33aQ9D2N9 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vps33aQ9D2N9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC21.36■■□□□ 1.01
Vps33aQ9D2N9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC21.36■■□□□ 1.01
Vps33aQ9D2N9 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps33aQ9D2N9 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC21.36■■□□□ 1.01
Vps33aQ9D2N9 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
Vps33aQ9D2N9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps33aQ9D2N9 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps33aQ9D2N9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps33aQ9D2N9 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
Vps33aQ9D2N9 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
Vps33aQ9D2N9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps33aQ9D2N9 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps33aQ9D2N9 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
Vps33aQ9D2N9 Gm5540-201ENSMUST00000131852 1848 ntBASIC21.35■■□□□ 1.01
Vps33aQ9D2N9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps33aQ9D2N9 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps33aQ9D2N9 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC21.35■■□□□ 1.01
Vps33aQ9D2N9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.35■■□□□ 1.01
Vps33aQ9D2N9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC21.35■■□□□ 1.01
Vps33aQ9D2N9 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps33aQ9D2N9 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps33aQ9D2N9 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Vps33aQ9D2N9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps33aQ9D2N9 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
Vps33aQ9D2N9 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC21.34■■□□□ 1.01
Vps33aQ9D2N9 Gm35558-201ENSMUST00000222675 2219 ntBASIC21.33■■□□□ 1.01
Vps33aQ9D2N9 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
Vps33aQ9D2N9 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Vps33aQ9D2N9 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC21.33■■□□□ 1.01
Vps33aQ9D2N9 Prmt9-201ENSMUST00000056237 2781 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vps33aQ9D2N9 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Vps33aQ9D2N9 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
Vps33aQ9D2N9 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Vps33aQ9D2N9 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Vps33aQ9D2N9 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps33aQ9D2N9 Fam105a-203ENSMUST00000226170 3043 ntBASIC21.32■■□□□ 1
Vps33aQ9D2N9 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps33aQ9D2N9 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps33aQ9D2N9 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC21.32■■□□□ 1
Vps33aQ9D2N9 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps33aQ9D2N9 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps33aQ9D2N9 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
Vps33aQ9D2N9 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC21.32■■□□□ 1
Vps33aQ9D2N9 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Vps33aQ9D2N9 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Vps33aQ9D2N9 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vps33aQ9D2N9 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC21.31■■□□□ 1
Vps33aQ9D2N9 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vps33aQ9D2N9 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC21.31■■□□□ 1
Vps33aQ9D2N9 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Vps33aQ9D2N9 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC21.31■■□□□ 1
Vps33aQ9D2N9 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vps33aQ9D2N9 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Vps33aQ9D2N9 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
Vps33aQ9D2N9 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
Vps33aQ9D2N9 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps33aQ9D2N9 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vps33aQ9D2N9 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Vps33aQ9D2N9 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vps33aQ9D2N9 AC117769.4-201ENSMUST00000225679 685 ntBASIC21.3■■□□□ 1
Vps33aQ9D2N9 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC21.3■■□□□ 1
Vps33aQ9D2N9 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.3■■□□□ 1
Vps33aQ9D2N9 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps33aQ9D2N9 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC21.3■■□□□ 1
Vps33aQ9D2N9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC21.3■■□□□ 1
Vps33aQ9D2N9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps33aQ9D2N9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Vps33aQ9D2N9 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.3■■□□□ 1
Vps33aQ9D2N9 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Vps33aQ9D2N9 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps33aQ9D2N9 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.29■■□□□ 1
Vps33aQ9D2N9 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.29■■□□□ 1
Vps33aQ9D2N9 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps33aQ9D2N9 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
Vps33aQ9D2N9 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps33aQ9D2N9 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Vps33aQ9D2N9 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
Vps33aQ9D2N9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vps33aQ9D2N9 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
Vps33aQ9D2N9 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
Vps33aQ9D2N9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC21.28■■□□□ 1
Vps33aQ9D2N9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC21.28■■□□□ 1
Vps33aQ9D2N9 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vps33aQ9D2N9 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vps33aQ9D2N9 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vps33aQ9D2N9 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Vps33aQ9D2N9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
Vps33aQ9D2N9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
Vps33aQ9D2N9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Vps33aQ9D2N9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.27■■□□□ 1
Vps33aQ9D2N9 Gm44428-201ENSMUST00000204474 874 ntBASIC21.27■■□□□ 1
Vps33aQ9D2N9 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Vps33aQ9D2N9 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC21.27■□□□□ 0.99
Vps33aQ9D2N9 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
Vps33aQ9D2N9 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Vps33aQ9D2N9 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms