Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.99■□□□□ 0.79
Trim42Q9D2H5 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim42Q9D2H5 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Trim42Q9D2H5 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Trim42Q9D2H5 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.99■□□□□ 0.79
Trim42Q9D2H5 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim42Q9D2H5 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim42Q9D2H5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Trim42Q9D2H5 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim42Q9D2H5 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim42Q9D2H5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.98■□□□□ 0.79
Trim42Q9D2H5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim42Q9D2H5 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim42Q9D2H5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim42Q9D2H5 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim42Q9D2H5 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC19.98■□□□□ 0.79
Trim42Q9D2H5 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim42Q9D2H5 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim42Q9D2H5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim42Q9D2H5 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Trim42Q9D2H5 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim42Q9D2H5 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim42Q9D2H5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim42Q9D2H5 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim42Q9D2H5 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim42Q9D2H5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim42Q9D2H5 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim42Q9D2H5 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim42Q9D2H5 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.97■□□□□ 0.79
Trim42Q9D2H5 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim42Q9D2H5 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Trim42Q9D2H5 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Trim42Q9D2H5 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
Trim42Q9D2H5 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Trim42Q9D2H5 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim42Q9D2H5 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Trim42Q9D2H5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.96■□□□□ 0.79
Trim42Q9D2H5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim42Q9D2H5 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Trim42Q9D2H5 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim42Q9D2H5 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim42Q9D2H5 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Trim42Q9D2H5 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Trim42Q9D2H5 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
Trim42Q9D2H5 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim42Q9D2H5 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim42Q9D2H5 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim42Q9D2H5 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim42Q9D2H5 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Trim42Q9D2H5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim42Q9D2H5 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim42Q9D2H5 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC19.94■□□□□ 0.78
Trim42Q9D2H5 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim42Q9D2H5 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim42Q9D2H5 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim42Q9D2H5 Gm43545-201ENSMUST00000196765 2779 ntBASIC19.94■□□□□ 0.78
Trim42Q9D2H5 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.94■□□□□ 0.78
Trim42Q9D2H5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Trim42Q9D2H5 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim42Q9D2H5 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim42Q9D2H5 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Trim42Q9D2H5 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim42Q9D2H5 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Trim42Q9D2H5 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.93■□□□□ 0.78
Trim42Q9D2H5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim42Q9D2H5 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Trim42Q9D2H5 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Trim42Q9D2H5 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.92■□□□□ 0.78
Trim42Q9D2H5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim42Q9D2H5 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim42Q9D2H5 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Trim42Q9D2H5 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim42Q9D2H5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Trim42Q9D2H5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Trim42Q9D2H5 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.91■□□□□ 0.78
Trim42Q9D2H5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim42Q9D2H5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim42Q9D2H5 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Trim42Q9D2H5 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Trim42Q9D2H5 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Trim42Q9D2H5 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim42Q9D2H5 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Trim42Q9D2H5 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim42Q9D2H5 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim42Q9D2H5 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim42Q9D2H5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Trim42Q9D2H5 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim42Q9D2H5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Trim42Q9D2H5 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim42Q9D2H5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Trim42Q9D2H5 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
Trim42Q9D2H5 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Trim42Q9D2H5 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.89■□□□□ 0.77
Trim42Q9D2H5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Trim42Q9D2H5 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Trim42Q9D2H5 Dapk1-207ENSMUST00000226059 5009 ntBASIC19.89■□□□□ 0.77
Trim42Q9D2H5 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim42Q9D2H5 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim42Q9D2H5 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Trim42Q9D2H5 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms