Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Cthrc1Q9D1D6 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cthrc1Q9D1D6 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC18.75■□□□□ 0.59
Cthrc1Q9D1D6 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Cthrc1Q9D1D6 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cthrc1Q9D1D6 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Cthrc1Q9D1D6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cthrc1Q9D1D6 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Cthrc1Q9D1D6 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cthrc1Q9D1D6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.74■□□□□ 0.59
Cthrc1Q9D1D6 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Cthrc1Q9D1D6 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Cthrc1Q9D1D6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cthrc1Q9D1D6 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cthrc1Q9D1D6 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cthrc1Q9D1D6 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.73■□□□□ 0.59
Cthrc1Q9D1D6 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cthrc1Q9D1D6 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cthrc1Q9D1D6 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cthrc1Q9D1D6 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cthrc1Q9D1D6 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cthrc1Q9D1D6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cthrc1Q9D1D6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Cthrc1Q9D1D6 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Cthrc1Q9D1D6 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cthrc1Q9D1D6 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cthrc1Q9D1D6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.72■□□□□ 0.59
Cthrc1Q9D1D6 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cthrc1Q9D1D6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cthrc1Q9D1D6 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cthrc1Q9D1D6 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
Cthrc1Q9D1D6 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Cthrc1Q9D1D6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cthrc1Q9D1D6 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cthrc1Q9D1D6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cthrc1Q9D1D6 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cthrc1Q9D1D6 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cthrc1Q9D1D6 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.72■□□□□ 0.59
Cthrc1Q9D1D6 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cthrc1Q9D1D6 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cthrc1Q9D1D6 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Cthrc1Q9D1D6 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cthrc1Q9D1D6 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Cthrc1Q9D1D6 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Cthrc1Q9D1D6 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cthrc1Q9D1D6 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cthrc1Q9D1D6 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Cthrc1Q9D1D6 Appbp2os-202ENSMUST00000206972 447 ntBASIC18.71■□□□□ 0.59
Cthrc1Q9D1D6 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC18.71■□□□□ 0.59
Cthrc1Q9D1D6 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Cthrc1Q9D1D6 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cthrc1Q9D1D6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cthrc1Q9D1D6 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Cthrc1Q9D1D6 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cthrc1Q9D1D6 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
Cthrc1Q9D1D6 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cthrc1Q9D1D6 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Cthrc1Q9D1D6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Cthrc1Q9D1D6 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cthrc1Q9D1D6 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cthrc1Q9D1D6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.69■□□□□ 0.58
Cthrc1Q9D1D6 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cthrc1Q9D1D6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cthrc1Q9D1D6 Gm12821-201ENSMUST00000120022 600 ntBASIC18.69■□□□□ 0.58
Cthrc1Q9D1D6 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cthrc1Q9D1D6 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Cthrc1Q9D1D6 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Cthrc1Q9D1D6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cthrc1Q9D1D6 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cthrc1Q9D1D6 Gm27454-201ENSMUST00000185090 204 ntBASIC18.68■□□□□ 0.58
Cthrc1Q9D1D6 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cthrc1Q9D1D6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cthrc1Q9D1D6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Cthrc1Q9D1D6 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Cthrc1Q9D1D6 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Cthrc1Q9D1D6 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cthrc1Q9D1D6 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cthrc1Q9D1D6 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC18.67■□□□□ 0.58
Cthrc1Q9D1D6 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cthrc1Q9D1D6 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Cthrc1Q9D1D6 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.67■□□□□ 0.58
Cthrc1Q9D1D6 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.67■□□□□ 0.58
Cthrc1Q9D1D6 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Cthrc1Q9D1D6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cthrc1Q9D1D6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Cthrc1Q9D1D6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cthrc1Q9D1D6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cthrc1Q9D1D6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Cthrc1Q9D1D6 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Cthrc1Q9D1D6 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Cthrc1Q9D1D6 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.66■□□□□ 0.58
Cthrc1Q9D1D6 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.66■□□□□ 0.58
Cthrc1Q9D1D6 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.66■□□□□ 0.58
Cthrc1Q9D1D6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cthrc1Q9D1D6 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cthrc1Q9D1D6 Gm8770-201ENSMUST00000121113 1109 ntBASIC18.65■□□□□ 0.58
Cthrc1Q9D1D6 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cthrc1Q9D1D6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cthrc1Q9D1D6 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Cthrc1Q9D1D6 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms