Protein–RNA interactions for Protein: Q9CYR0

Ssbp1, Single-stranded DNA-binding protein, mitochondrial, mousemouse

Known RBP Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp1Q9CYR0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ssbp1Q9CYR0 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Ssbp1Q9CYR0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.06
Ssbp1Q9CYR0 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssbp1Q9CYR0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssbp1Q9CYR0 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssbp1Q9CYR0 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssbp1Q9CYR0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssbp1Q9CYR0 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ssbp1Q9CYR0 Ddx41-204ENSMUST00000224765 2199 ntBASIC14.7□□□□□ -0.06
Ssbp1Q9CYR0 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ssbp1Q9CYR0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Ssbp1Q9CYR0 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssbp1Q9CYR0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssbp1Q9CYR0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssbp1Q9CYR0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Ssbp1Q9CYR0 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ssbp1Q9CYR0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Ssbp1Q9CYR0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Ssbp1Q9CYR0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
Ssbp1Q9CYR0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ssbp1Q9CYR0 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ssbp1Q9CYR0 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ssbp1Q9CYR0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC14.69□□□□□ -0.06
Ssbp1Q9CYR0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ssbp1Q9CYR0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ssbp1Q9CYR0 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ssbp1Q9CYR0 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Ssbp1Q9CYR0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ssbp1Q9CYR0 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ssbp1Q9CYR0 Zfp131-205ENSMUST00000223812 663 ntBASIC14.69□□□□□ -0.06
Ssbp1Q9CYR0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
Ssbp1Q9CYR0 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ssbp1Q9CYR0 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Ssbp1Q9CYR0 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Ssbp1Q9CYR0 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.69□□□□□ -0.06
Ssbp1Q9CYR0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Ssbp1Q9CYR0 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp1Q9CYR0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Ssbp1Q9CYR0 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp1Q9CYR0 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp1Q9CYR0 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp1Q9CYR0 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.68□□□□□ -0.06
Ssbp1Q9CYR0 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp1Q9CYR0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp1Q9CYR0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp1Q9CYR0 Pantr1-205ENSMUST00000177136 1543 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp1Q9CYR0 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp1Q9CYR0 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp1Q9CYR0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp1Q9CYR0 Qrich1-209ENSMUST00000194385 975 ntTSL 2 BASIC14.68□□□□□ -0.06
Ssbp1Q9CYR0 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC14.68□□□□□ -0.06
Ssbp1Q9CYR0 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp1Q9CYR0 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp1Q9CYR0 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Ssbp1Q9CYR0 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC14.67□□□□□ -0.06
Ssbp1Q9CYR0 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ssbp1Q9CYR0 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC14.67□□□□□ -0.06
Ssbp1Q9CYR0 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ssbp1Q9CYR0 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ssbp1Q9CYR0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ssbp1Q9CYR0 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ssbp1Q9CYR0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC14.67□□□□□ -0.06
Ssbp1Q9CYR0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ssbp1Q9CYR0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ssbp1Q9CYR0 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Ssbp1Q9CYR0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ssbp1Q9CYR0 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC14.67□□□□□ -0.06
Ssbp1Q9CYR0 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Ssbp1Q9CYR0 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp1Q9CYR0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp1Q9CYR0 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp1Q9CYR0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp1Q9CYR0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.66□□□□□ -0.06
Ssbp1Q9CYR0 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp1Q9CYR0 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC14.66□□□□□ -0.06
Ssbp1Q9CYR0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp1Q9CYR0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp1Q9CYR0 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp1Q9CYR0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp1Q9CYR0 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp1Q9CYR0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp1Q9CYR0 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp1Q9CYR0 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Ssbp1Q9CYR0 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp1Q9CYR0 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp1Q9CYR0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp1Q9CYR0 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp1Q9CYR0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp1Q9CYR0 Gm9397-201ENSMUST00000200125 605 ntBASIC14.65□□□□□ -0.06
Ssbp1Q9CYR0 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Ssbp1Q9CYR0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp1Q9CYR0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp1Q9CYR0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Ssbp1Q9CYR0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC14.65□□□□□ -0.06
Ssbp1Q9CYR0 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.65□□□□□ -0.06
Ssbp1Q9CYR0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssbp1Q9CYR0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssbp1Q9CYR0 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Ssbp1Q9CYR0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms