Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ssr1Q9CY50 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ssr1Q9CY50 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ssr1Q9CY50 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ssr1Q9CY50 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ssr1Q9CY50 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.63■■□□□ 1.05
Ssr1Q9CY50 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ssr1Q9CY50 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ssr1Q9CY50 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.63■■□□□ 1.05
Ssr1Q9CY50 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ssr1Q9CY50 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ssr1Q9CY50 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.63■■□□□ 1.05
Ssr1Q9CY50 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ssr1Q9CY50 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ssr1Q9CY50 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ssr1Q9CY50 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ssr1Q9CY50 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.62■■□□□ 1.05
Ssr1Q9CY50 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Ssr1Q9CY50 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC21.62■■□□□ 1.05
Ssr1Q9CY50 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ssr1Q9CY50 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.61■■□□□ 1.05
Ssr1Q9CY50 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ssr1Q9CY50 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ssr1Q9CY50 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Ssr1Q9CY50 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ssr1Q9CY50 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC21.61■■□□□ 1.05
Ssr1Q9CY50 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ssr1Q9CY50 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ssr1Q9CY50 Gm10399-202ENSMUST00000202768 748 ntBASIC21.61■■□□□ 1.05
Ssr1Q9CY50 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.61■■□□□ 1.05
Ssr1Q9CY50 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ssr1Q9CY50 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Ssr1Q9CY50 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ssr1Q9CY50 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ssr1Q9CY50 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ssr1Q9CY50 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ssr1Q9CY50 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ssr1Q9CY50 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ssr1Q9CY50 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ssr1Q9CY50 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Ssr1Q9CY50 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC21.6■■□□□ 1.05
Ssr1Q9CY50 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.6■■□□□ 1.05
Ssr1Q9CY50 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Ssr1Q9CY50 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ssr1Q9CY50 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ssr1Q9CY50 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ssr1Q9CY50 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ssr1Q9CY50 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ssr1Q9CY50 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ssr1Q9CY50 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ssr1Q9CY50 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ssr1Q9CY50 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.59■■□□□ 1.05
Ssr1Q9CY50 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ssr1Q9CY50 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ssr1Q9CY50 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.59■■□□□ 1.05
Ssr1Q9CY50 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ssr1Q9CY50 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ssr1Q9CY50 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ssr1Q9CY50 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ssr1Q9CY50 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ssr1Q9CY50 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ssr1Q9CY50 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ssr1Q9CY50 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ssr1Q9CY50 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ssr1Q9CY50 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ssr1Q9CY50 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC21.58■■□□□ 1.05
Ssr1Q9CY50 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.58■■□□□ 1.05
Ssr1Q9CY50 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.58■■□□□ 1.05
Ssr1Q9CY50 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Ssr1Q9CY50 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ssr1Q9CY50 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ssr1Q9CY50 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ssr1Q9CY50 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ssr1Q9CY50 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ssr1Q9CY50 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ssr1Q9CY50 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ssr1Q9CY50 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ssr1Q9CY50 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ssr1Q9CY50 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ssr1Q9CY50 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ssr1Q9CY50 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Ssr1Q9CY50 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ssr1Q9CY50 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Ssr1Q9CY50 Gm15043-201ENSMUST00000118843 1543 ntBASIC21.56■■□□□ 1.04
Ssr1Q9CY50 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Ssr1Q9CY50 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ssr1Q9CY50 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ssr1Q9CY50 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Ssr1Q9CY50 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC21.56■■□□□ 1.04
Ssr1Q9CY50 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ssr1Q9CY50 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ssr1Q9CY50 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ssr1Q9CY50 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
Ssr1Q9CY50 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ssr1Q9CY50 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ssr1Q9CY50 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ssr1Q9CY50 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.55■■□□□ 1.04
Ssr1Q9CY50 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ssr1Q9CY50 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ssr1Q9CY50 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms