Protein–RNA interactions for Protein: Q9CQQ8

Lsm7, U6 snRNA-associated Sm-like protein LSm7, mousemouse

Known RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm7Q9CQQ8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm7Q9CQQ8 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm7Q9CQQ8 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm7Q9CQQ8 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm7Q9CQQ8 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Lsm7Q9CQQ8 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm7Q9CQQ8 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm7Q9CQQ8 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lsm7Q9CQQ8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm7Q9CQQ8 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm7Q9CQQ8 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.35■□□□□ 0.85
Lsm7Q9CQQ8 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm7Q9CQQ8 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm7Q9CQQ8 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm7Q9CQQ8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm7Q9CQQ8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm7Q9CQQ8 Spcs1-204ENSMUST00000226782 949 ntBASIC20.35■□□□□ 0.85
Lsm7Q9CQQ8 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm7Q9CQQ8 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm7Q9CQQ8 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm7Q9CQQ8 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lsm7Q9CQQ8 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC20.34■□□□□ 0.85
Lsm7Q9CQQ8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm7Q9CQQ8 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm7Q9CQQ8 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Lsm7Q9CQQ8 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.34■□□□□ 0.85
Lsm7Q9CQQ8 Mir6236-201ENSMUST00000184437 123 ntBASIC20.34■□□□□ 0.85
Lsm7Q9CQQ8 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.34■□□□□ 0.85
Lsm7Q9CQQ8 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm7Q9CQQ8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm7Q9CQQ8 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Lsm7Q9CQQ8 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Lsm7Q9CQQ8 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lsm7Q9CQQ8 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lsm7Q9CQQ8 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Lsm7Q9CQQ8 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lsm7Q9CQQ8 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
Lsm7Q9CQQ8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Lsm7Q9CQQ8 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.33■□□□□ 0.84
Lsm7Q9CQQ8 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.32■□□□□ 0.84
Lsm7Q9CQQ8 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm7Q9CQQ8 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm7Q9CQQ8 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm7Q9CQQ8 Gm12251-201ENSMUST00000117893 792 ntBASIC20.32■□□□□ 0.84
Lsm7Q9CQQ8 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
Lsm7Q9CQQ8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm7Q9CQQ8 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lsm7Q9CQQ8 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Lsm7Q9CQQ8 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm7Q9CQQ8 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.31■□□□□ 0.84
Lsm7Q9CQQ8 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Lsm7Q9CQQ8 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm7Q9CQQ8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm7Q9CQQ8 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lsm7Q9CQQ8 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.3■□□□□ 0.84
Lsm7Q9CQQ8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm7Q9CQQ8 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm7Q9CQQ8 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.3■□□□□ 0.84
Lsm7Q9CQQ8 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.3■□□□□ 0.84
Lsm7Q9CQQ8 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm7Q9CQQ8 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Lsm7Q9CQQ8 Gm43173-201ENSMUST00000202246 593 ntBASIC20.3■□□□□ 0.84
Lsm7Q9CQQ8 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.3■□□□□ 0.84
Lsm7Q9CQQ8 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm7Q9CQQ8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm7Q9CQQ8 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm7Q9CQQ8 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm7Q9CQQ8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm7Q9CQQ8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lsm7Q9CQQ8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lsm7Q9CQQ8 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lsm7Q9CQQ8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lsm7Q9CQQ8 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lsm7Q9CQQ8 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lsm7Q9CQQ8 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
Lsm7Q9CQQ8 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lsm7Q9CQQ8 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lsm7Q9CQQ8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm7Q9CQQ8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Lsm7Q9CQQ8 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm7Q9CQQ8 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm7Q9CQQ8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm7Q9CQQ8 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lsm7Q9CQQ8 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.28■□□□□ 0.84
Lsm7Q9CQQ8 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsm7Q9CQQ8 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsm7Q9CQQ8 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Lsm7Q9CQQ8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsm7Q9CQQ8 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.27■□□□□ 0.84
Lsm7Q9CQQ8 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.27■□□□□ 0.84
Lsm7Q9CQQ8 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lsm7Q9CQQ8 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lsm7Q9CQQ8 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lsm7Q9CQQ8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lsm7Q9CQQ8 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lsm7Q9CQQ8 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lsm7Q9CQQ8 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Lsm7Q9CQQ8 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Lsm7Q9CQQ8 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lsm7Q9CQQ8 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms