Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim8Q99PJ2 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim8Q99PJ2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim8Q99PJ2 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim8Q99PJ2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.67■□□□□ 0.74
Trim8Q99PJ2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim8Q99PJ2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim8Q99PJ2 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim8Q99PJ2 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Trim8Q99PJ2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim8Q99PJ2 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Trim8Q99PJ2 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim8Q99PJ2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim8Q99PJ2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim8Q99PJ2 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim8Q99PJ2 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.66■□□□□ 0.74
Trim8Q99PJ2 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim8Q99PJ2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim8Q99PJ2 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim8Q99PJ2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Trim8Q99PJ2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim8Q99PJ2 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Trim8Q99PJ2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Trim8Q99PJ2 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Trim8Q99PJ2 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim8Q99PJ2 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim8Q99PJ2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim8Q99PJ2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Trim8Q99PJ2 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim8Q99PJ2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim8Q99PJ2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Trim8Q99PJ2 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.65■□□□□ 0.74
Trim8Q99PJ2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim8Q99PJ2 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim8Q99PJ2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Trim8Q99PJ2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.74
Trim8Q99PJ2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim8Q99PJ2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Trim8Q99PJ2 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim8Q99PJ2 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Trim8Q99PJ2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
Trim8Q99PJ2 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim8Q99PJ2 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim8Q99PJ2 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Trim8Q99PJ2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim8Q99PJ2 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim8Q99PJ2 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim8Q99PJ2 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC19.63■□□□□ 0.73
Trim8Q99PJ2 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim8Q99PJ2 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.63■□□□□ 0.73
Trim8Q99PJ2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Trim8Q99PJ2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
Trim8Q99PJ2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Trim8Q99PJ2 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.62■□□□□ 0.73
Trim8Q99PJ2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim8Q99PJ2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim8Q99PJ2 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim8Q99PJ2 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim8Q99PJ2 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.62■□□□□ 0.73
Trim8Q99PJ2 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Trim8Q99PJ2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.62■□□□□ 0.73
Trim8Q99PJ2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Trim8Q99PJ2 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.62■□□□□ 0.73
Trim8Q99PJ2 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.62■□□□□ 0.73
Trim8Q99PJ2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim8Q99PJ2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim8Q99PJ2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim8Q99PJ2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim8Q99PJ2 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Trim8Q99PJ2 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim8Q99PJ2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim8Q99PJ2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Trim8Q99PJ2 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim8Q99PJ2 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim8Q99PJ2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim8Q99PJ2 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim8Q99PJ2 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC19.61■□□□□ 0.73
Trim8Q99PJ2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim8Q99PJ2 Gm10616-201ENSMUST00000205285 2127 ntBASIC19.61■□□□□ 0.73
Trim8Q99PJ2 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Trim8Q99PJ2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Trim8Q99PJ2 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim8Q99PJ2 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim8Q99PJ2 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim8Q99PJ2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim8Q99PJ2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim8Q99PJ2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim8Q99PJ2 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim8Q99PJ2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim8Q99PJ2 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim8Q99PJ2 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.6■□□□□ 0.73
Trim8Q99PJ2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Trim8Q99PJ2 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Trim8Q99PJ2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.6■□□□□ 0.73
Trim8Q99PJ2 Hsf1-204ENSMUST00000226872 2104 ntBASIC19.6■□□□□ 0.73
Trim8Q99PJ2 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Trim8Q99PJ2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim8Q99PJ2 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Trim8Q99PJ2 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Trim8Q99PJ2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 60 ms