Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC20.95■□□□□ 0.94
Cdh23Q99PF4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.95■□□□□ 0.94
Cdh23Q99PF4 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cdh23Q99PF4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.94■□□□□ 0.94
Cdh23Q99PF4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh23Q99PF4 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh23Q99PF4 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh23Q99PF4 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cdh23Q99PF4 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.94■□□□□ 0.94
Cdh23Q99PF4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC20.94■□□□□ 0.94
Cdh23Q99PF4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh23Q99PF4 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Cdh23Q99PF4 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh23Q99PF4 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh23Q99PF4 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh23Q99PF4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.94■□□□□ 0.94
Cdh23Q99PF4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cdh23Q99PF4 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cdh23Q99PF4 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.94■□□□□ 0.94
Cdh23Q99PF4 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh23Q99PF4 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC20.93■□□□□ 0.94
Cdh23Q99PF4 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh23Q99PF4 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.93■□□□□ 0.94
Cdh23Q99PF4 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh23Q99PF4 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh23Q99PF4 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC20.93■□□□□ 0.94
Cdh23Q99PF4 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh23Q99PF4 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh23Q99PF4 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cdh23Q99PF4 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.93■□□□□ 0.94
Cdh23Q99PF4 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh23Q99PF4 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh23Q99PF4 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh23Q99PF4 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh23Q99PF4 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC20.92■□□□□ 0.94
Cdh23Q99PF4 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh23Q99PF4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cdh23Q99PF4 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cdh23Q99PF4 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cdh23Q99PF4 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Cdh23Q99PF4 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Cdh23Q99PF4 Mir6982-201ENSMUST00000184354 68 ntBASIC20.91■□□□□ 0.94
Cdh23Q99PF4 Gm8520-201ENSMUST00000186517 868 ntBASIC20.91■□□□□ 0.94
Cdh23Q99PF4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdh23Q99PF4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdh23Q99PF4 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC20.91■□□□□ 0.94
Cdh23Q99PF4 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cdh23Q99PF4 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cdh23Q99PF4 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
Cdh23Q99PF4 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
Cdh23Q99PF4 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh23Q99PF4 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC20.9■□□□□ 0.94
Cdh23Q99PF4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh23Q99PF4 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cdh23Q99PF4 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh23Q99PF4 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh23Q99PF4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh23Q99PF4 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Cdh23Q99PF4 Gm11421-201ENSMUST00000122124 294 ntBASIC20.89■□□□□ 0.94
Cdh23Q99PF4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cdh23Q99PF4 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Cdh23Q99PF4 Ap3s1-204ENSMUST00000225520 957 ntBASIC20.89■□□□□ 0.94
Cdh23Q99PF4 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.89■□□□□ 0.94
Cdh23Q99PF4 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cdh23Q99PF4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cdh23Q99PF4 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Cdh23Q99PF4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh23Q99PF4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cdh23Q99PF4 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC20.89■□□□□ 0.93
Cdh23Q99PF4 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh23Q99PF4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh23Q99PF4 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh23Q99PF4 Gm7514-201ENSMUST00000209475 934 ntBASIC20.88■□□□□ 0.93
Cdh23Q99PF4 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh23Q99PF4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cdh23Q99PF4 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Cdh23Q99PF4 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.87■□□□□ 0.93
Cdh23Q99PF4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh23Q99PF4 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC20.87■□□□□ 0.93
Cdh23Q99PF4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh23Q99PF4 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh23Q99PF4 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh23Q99PF4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cdh23Q99PF4 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh23Q99PF4 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh23Q99PF4 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh23Q99PF4 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.86■□□□□ 0.93
Cdh23Q99PF4 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh23Q99PF4 Gm37856-201ENSMUST00000191634 999 ntBASIC20.86■□□□□ 0.93
Cdh23Q99PF4 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.86■□□□□ 0.93
Cdh23Q99PF4 Gm20049-201ENSMUST00000219950 730 ntBASIC20.86■□□□□ 0.93
Cdh23Q99PF4 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh23Q99PF4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cdh23Q99PF4 Gm42555-201ENSMUST00000199304 1039 ntBASIC20.85■□□□□ 0.93
Cdh23Q99PF4 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh23Q99PF4 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Cdh23Q99PF4 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
Cdh23Q99PF4 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh23Q99PF4 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cdh23Q99PF4 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 32.4 ms