Protein–RNA interactions for Protein: Q99NH8

Trem2, Triggering receptor expressed on myeloid cells 2, mousemouse

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem2Q99NH8 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.58■□□□□ 0.89
Trem2Q99NH8 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.58■□□□□ 0.89
Trem2Q99NH8 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Trem2Q99NH8 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trem2Q99NH8 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trem2Q99NH8 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trem2Q99NH8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Trem2Q99NH8 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trem2Q99NH8 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Trem2Q99NH8 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Trem2Q99NH8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Trem2Q99NH8 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Trem2Q99NH8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trem2Q99NH8 Mir6236-201ENSMUST00000184437 123 ntBASIC20.56■□□□□ 0.88
Trem2Q99NH8 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trem2Q99NH8 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trem2Q99NH8 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC20.56■□□□□ 0.88
Trem2Q99NH8 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.55■□□□□ 0.88
Trem2Q99NH8 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Trem2Q99NH8 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Trem2Q99NH8 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.55■□□□□ 0.88
Trem2Q99NH8 Gm22238-201ENSMUST00000175222 88 ntBASIC20.55■□□□□ 0.88
Trem2Q99NH8 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.55■□□□□ 0.88
Trem2Q99NH8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.55■□□□□ 0.88
Trem2Q99NH8 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Trem2Q99NH8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trem2Q99NH8 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trem2Q99NH8 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trem2Q99NH8 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trem2Q99NH8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trem2Q99NH8 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trem2Q99NH8 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trem2Q99NH8 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Trem2Q99NH8 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Trem2Q99NH8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trem2Q99NH8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trem2Q99NH8 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trem2Q99NH8 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Trem2Q99NH8 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.53■□□□□ 0.88
Trem2Q99NH8 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.53■□□□□ 0.88
Trem2Q99NH8 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Trem2Q99NH8 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.53■□□□□ 0.88
Trem2Q99NH8 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.53■□□□□ 0.88
Trem2Q99NH8 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trem2Q99NH8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trem2Q99NH8 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trem2Q99NH8 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trem2Q99NH8 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Trem2Q99NH8 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trem2Q99NH8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Trem2Q99NH8 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC20.53■□□□□ 0.88
Trem2Q99NH8 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trem2Q99NH8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Trem2Q99NH8 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.52■□□□□ 0.88
Trem2Q99NH8 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.52■□□□□ 0.88
Trem2Q99NH8 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trem2Q99NH8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Trem2Q99NH8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.52■□□□□ 0.88
Trem2Q99NH8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.52■□□□□ 0.88
Trem2Q99NH8 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Trem2Q99NH8 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Trem2Q99NH8 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trem2Q99NH8 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trem2Q99NH8 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trem2Q99NH8 Gm45102-201ENSMUST00000207427 857 ntBASIC20.51■□□□□ 0.87
Trem2Q99NH8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.51■□□□□ 0.87
Trem2Q99NH8 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trem2Q99NH8 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Trem2Q99NH8 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trem2Q99NH8 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
Trem2Q99NH8 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trem2Q99NH8 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Trem2Q99NH8 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.5■□□□□ 0.87
Trem2Q99NH8 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trem2Q99NH8 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.5■□□□□ 0.87
Trem2Q99NH8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Trem2Q99NH8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Trem2Q99NH8 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Trem2Q99NH8 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trem2Q99NH8 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trem2Q99NH8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Trem2Q99NH8 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trem2Q99NH8 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Trem2Q99NH8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Trem2Q99NH8 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trem2Q99NH8 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trem2Q99NH8 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trem2Q99NH8 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trem2Q99NH8 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.48■□□□□ 0.87
Trem2Q99NH8 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trem2Q99NH8 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Trem2Q99NH8 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Trem2Q99NH8 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Trem2Q99NH8 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trem2Q99NH8 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.47■□□□□ 0.87
Trem2Q99NH8 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trem2Q99NH8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trem2Q99NH8 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Trem2Q99NH8 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Trem2Q99NH8 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms