Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx6-1Q99MA9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx6-1Q99MA9 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx6-1Q99MA9 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.93■□□□□ 0.62
Nkx6-1Q99MA9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Nkx6-1Q99MA9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.93■□□□□ 0.62
Nkx6-1Q99MA9 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx6-1Q99MA9 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.92■□□□□ 0.62
Nkx6-1Q99MA9 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx6-1Q99MA9 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.92■□□□□ 0.62
Nkx6-1Q99MA9 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx6-1Q99MA9 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC18.92■□□□□ 0.62
Nkx6-1Q99MA9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
Nkx6-1Q99MA9 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx6-1Q99MA9 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx6-1Q99MA9 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
Nkx6-1Q99MA9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx6-1Q99MA9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx6-1Q99MA9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx6-1Q99MA9 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx6-1Q99MA9 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx6-1Q99MA9 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx6-1Q99MA9 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Nkx6-1Q99MA9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Nkx6-1Q99MA9 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx6-1Q99MA9 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx6-1Q99MA9 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx6-1Q99MA9 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx6-1Q99MA9 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx6-1Q99MA9 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Nkx6-1Q99MA9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC18.9■□□□□ 0.62
Nkx6-1Q99MA9 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Nkx6-1Q99MA9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx6-1Q99MA9 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx6-1Q99MA9 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC18.9■□□□□ 0.62
Nkx6-1Q99MA9 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx6-1Q99MA9 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Nkx6-1Q99MA9 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
Nkx6-1Q99MA9 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx6-1Q99MA9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx6-1Q99MA9 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.9■□□□□ 0.62
Nkx6-1Q99MA9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx6-1Q99MA9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Nkx6-1Q99MA9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Nkx6-1Q99MA9 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Nkx6-1Q99MA9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.89■□□□□ 0.62
Nkx6-1Q99MA9 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx6-1Q99MA9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx6-1Q99MA9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx6-1Q99MA9 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.89■□□□□ 0.61
Nkx6-1Q99MA9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx6-1Q99MA9 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.89■□□□□ 0.61
Nkx6-1Q99MA9 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Nkx6-1Q99MA9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx6-1Q99MA9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx6-1Q99MA9 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx6-1Q99MA9 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx6-1Q99MA9 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Nkx6-1Q99MA9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC18.88■□□□□ 0.61
Nkx6-1Q99MA9 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
Nkx6-1Q99MA9 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.88■□□□□ 0.61
Nkx6-1Q99MA9 Nespas-201ENSMUST00000143738 1083 ntBASIC18.88■□□□□ 0.61
Nkx6-1Q99MA9 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx6-1Q99MA9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx6-1Q99MA9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx6-1Q99MA9 AC137127.1-201ENSMUST00000213466 1078 ntBASIC18.88■□□□□ 0.61
Nkx6-1Q99MA9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
Nkx6-1Q99MA9 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx6-1Q99MA9 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Nkx6-1Q99MA9 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx6-1Q99MA9 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx6-1Q99MA9 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx6-1Q99MA9 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx6-1Q99MA9 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx6-1Q99MA9 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.88■□□□□ 0.61
Nkx6-1Q99MA9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
Nkx6-1Q99MA9 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx6-1Q99MA9 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.87■□□□□ 0.61
Nkx6-1Q99MA9 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx6-1Q99MA9 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.87■□□□□ 0.61
Nkx6-1Q99MA9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.87■□□□□ 0.61
Nkx6-1Q99MA9 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Nkx6-1Q99MA9 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.87■□□□□ 0.61
Nkx6-1Q99MA9 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.87■□□□□ 0.61
Nkx6-1Q99MA9 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx6-1Q99MA9 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx6-1Q99MA9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx6-1Q99MA9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
Nkx6-1Q99MA9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Nkx6-1Q99MA9 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx6-1Q99MA9 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx6-1Q99MA9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Nkx6-1Q99MA9 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Nkx6-1Q99MA9 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx6-1Q99MA9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx6-1Q99MA9 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Nkx6-1Q99MA9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx6-1Q99MA9 Gm13234-201ENSMUST00000120010 747 ntBASIC18.85■□□□□ 0.61
Nkx6-1Q99MA9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Nkx6-1Q99MA9 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms