Protein–RNA interactions for Protein: Q99KL7

Rab28, Ras-related protein Rab-28, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab28Q99KL7 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rab28Q99KL7 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.48■□□□□ 0.71
Rab28Q99KL7 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.48■□□□□ 0.71
Rab28Q99KL7 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rab28Q99KL7 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rab28Q99KL7 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rab28Q99KL7 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rab28Q99KL7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Rab28Q99KL7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rab28Q99KL7 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Rab28Q99KL7 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rab28Q99KL7 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rab28Q99KL7 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rab28Q99KL7 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rab28Q99KL7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.47■□□□□ 0.71
Rab28Q99KL7 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Rab28Q99KL7 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rab28Q99KL7 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Rab28Q99KL7 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rab28Q99KL7 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
Rab28Q99KL7 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rab28Q99KL7 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rab28Q99KL7 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rab28Q99KL7 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC19.46■□□□□ 0.71
Rab28Q99KL7 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC19.46■□□□□ 0.71
Rab28Q99KL7 Gm27454-201ENSMUST00000185090 204 ntBASIC19.46■□□□□ 0.71
Rab28Q99KL7 Gm43137-201ENSMUST00000198052 594 ntBASIC19.46■□□□□ 0.71
Rab28Q99KL7 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC19.46■□□□□ 0.71
Rab28Q99KL7 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Rab28Q99KL7 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rab28Q99KL7 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rab28Q99KL7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rab28Q99KL7 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Rab28Q99KL7 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC19.46■□□□□ 0.71
Rab28Q99KL7 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab28Q99KL7 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab28Q99KL7 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Rab28Q99KL7 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab28Q99KL7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.45■□□□□ 0.7
Rab28Q99KL7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab28Q99KL7 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Rab28Q99KL7 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
Rab28Q99KL7 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.45■□□□□ 0.7
Rab28Q99KL7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab28Q99KL7 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Rab28Q99KL7 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.45■□□□□ 0.7
Rab28Q99KL7 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab28Q99KL7 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Rab28Q99KL7 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab28Q99KL7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab28Q99KL7 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab28Q99KL7 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.44■□□□□ 0.7
Rab28Q99KL7 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.44■□□□□ 0.7
Rab28Q99KL7 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Rab28Q99KL7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.44■□□□□ 0.7
Rab28Q99KL7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab28Q99KL7 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Rab28Q99KL7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab28Q99KL7 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab28Q99KL7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rab28Q99KL7 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rab28Q99KL7 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rab28Q99KL7 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab28Q99KL7 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Rab28Q99KL7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Rab28Q99KL7 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab28Q99KL7 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab28Q99KL7 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Rab28Q99KL7 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.42■□□□□ 0.7
Rab28Q99KL7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab28Q99KL7 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab28Q99KL7 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Rab28Q99KL7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab28Q99KL7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab28Q99KL7 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Rab28Q99KL7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rab28Q99KL7 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Rab28Q99KL7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rab28Q99KL7 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rab28Q99KL7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC19.41■□□□□ 0.7
Rab28Q99KL7 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.41■□□□□ 0.7
Rab28Q99KL7 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rab28Q99KL7 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.41■□□□□ 0.7
Rab28Q99KL7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rab28Q99KL7 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC19.41■□□□□ 0.7
Rab28Q99KL7 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Rab28Q99KL7 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab28Q99KL7 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rab28Q99KL7 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab28Q99KL7 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rab28Q99KL7 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Rab28Q99KL7 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab28Q99KL7 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rab28Q99KL7 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.39■□□□□ 0.7
Rab28Q99KL7 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rab28Q99KL7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rab28Q99KL7 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Rab28Q99KL7 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Rab28Q99KL7 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC19.39■□□□□ 0.69
Rab28Q99KL7 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms