Protein–RNA interactions for Protein: Q99JR8

Smarcd2, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2, mousemouse

Known RBP Predictions only

Length 531 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd2Q99JR8 Gm42778-201ENSMUST00000199644 553 ntBASIC20.5■□□□□ 0.87
Smarcd2Q99JR8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcd2Q99JR8 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcd2Q99JR8 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Smarcd2Q99JR8 Trim27-207ENSMUST00000223065 2046 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcd2Q99JR8 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Smarcd2Q99JR8 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcd2Q99JR8 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcd2Q99JR8 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC20.49■□□□□ 0.87
Smarcd2Q99JR8 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Smarcd2Q99JR8 AV356131-201ENSMUST00000206201 750 ntBASIC20.49■□□□□ 0.87
Smarcd2Q99JR8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Smarcd2Q99JR8 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC20.49■□□□□ 0.87
Smarcd2Q99JR8 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcd2Q99JR8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Smarcd2Q99JR8 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcd2Q99JR8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcd2Q99JR8 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcd2Q99JR8 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcd2Q99JR8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcd2Q99JR8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcd2Q99JR8 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Smarcd2Q99JR8 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
Smarcd2Q99JR8 AC137127.1-201ENSMUST00000213466 1078 ntBASIC20.47■□□□□ 0.87
Smarcd2Q99JR8 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Smarcd2Q99JR8 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC20.47■□□□□ 0.87
Smarcd2Q99JR8 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcd2Q99JR8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcd2Q99JR8 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcd2Q99JR8 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.46■□□□□ 0.87
Smarcd2Q99JR8 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcd2Q99JR8 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.46■□□□□ 0.87
Smarcd2Q99JR8 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Smarcd2Q99JR8 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcd2Q99JR8 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcd2Q99JR8 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcd2Q99JR8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Smarcd2Q99JR8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.45■□□□□ 0.86
Smarcd2Q99JR8 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC20.45■□□□□ 0.86
Smarcd2Q99JR8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.45■□□□□ 0.86
Smarcd2Q99JR8 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Smarcd2Q99JR8 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcd2Q99JR8 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC20.44■□□□□ 0.86
Smarcd2Q99JR8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcd2Q99JR8 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcd2Q99JR8 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
Smarcd2Q99JR8 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcd2Q99JR8 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Smarcd2Q99JR8 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.44■□□□□ 0.86
Smarcd2Q99JR8 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Smarcd2Q99JR8 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcd2Q99JR8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcd2Q99JR8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.43■□□□□ 0.86
Smarcd2Q99JR8 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcd2Q99JR8 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcd2Q99JR8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcd2Q99JR8 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcd2Q99JR8 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC20.43■□□□□ 0.86
Smarcd2Q99JR8 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcd2Q99JR8 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcd2Q99JR8 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcd2Q99JR8 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Smarcd2Q99JR8 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcd2Q99JR8 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
Smarcd2Q99JR8 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC20.42■□□□□ 0.86
Smarcd2Q99JR8 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC20.42■□□□□ 0.86
Smarcd2Q99JR8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcd2Q99JR8 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Smarcd2Q99JR8 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Smarcd2Q99JR8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.41■□□□□ 0.86
Smarcd2Q99JR8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcd2Q99JR8 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcd2Q99JR8 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcd2Q99JR8 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcd2Q99JR8 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcd2Q99JR8 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcd2Q99JR8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcd2Q99JR8 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcd2Q99JR8 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Smarcd2Q99JR8 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcd2Q99JR8 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcd2Q99JR8 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcd2Q99JR8 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcd2Q99JR8 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcd2Q99JR8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Smarcd2Q99JR8 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Smarcd2Q99JR8 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Smarcd2Q99JR8 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
Smarcd2Q99JR8 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcd2Q99JR8 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcd2Q99JR8 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC20.39■□□□□ 0.85
Smarcd2Q99JR8 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcd2Q99JR8 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcd2Q99JR8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Smarcd2Q99JR8 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcd2Q99JR8 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcd2Q99JR8 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Smarcd2Q99JR8 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.38■□□□□ 0.85
Smarcd2Q99JR8 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Smarcd2Q99JR8 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms