Protein–RNA interactions for Protein: Q921W0

Chmp1a, Charged multivesicular body protein 1a, mousemouse

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1aQ921W0 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC17.69■□□□□ 0.42
Chmp1aQ921W0 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp1aQ921W0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Chmp1aQ921W0 Gm27502-201ENSMUST00000183495 199 ntBASIC17.69■□□□□ 0.42
Chmp1aQ921W0 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC17.69■□□□□ 0.42
Chmp1aQ921W0 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp1aQ921W0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp1aQ921W0 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC17.69■□□□□ 0.42
Chmp1aQ921W0 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Chmp1aQ921W0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC17.68■□□□□ 0.42
Chmp1aQ921W0 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp1aQ921W0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Chmp1aQ921W0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp1aQ921W0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp1aQ921W0 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Chmp1aQ921W0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp1aQ921W0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp1aQ921W0 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp1aQ921W0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp1aQ921W0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Chmp1aQ921W0 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.68■□□□□ 0.42
Chmp1aQ921W0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp1aQ921W0 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp1aQ921W0 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp1aQ921W0 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp1aQ921W0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC17.67■□□□□ 0.42
Chmp1aQ921W0 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Chmp1aQ921W0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp1aQ921W0 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp1aQ921W0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp1aQ921W0 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Chmp1aQ921W0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
Chmp1aQ921W0 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp1aQ921W0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.66■□□□□ 0.42
Chmp1aQ921W0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp1aQ921W0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp1aQ921W0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.66■□□□□ 0.42
Chmp1aQ921W0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp1aQ921W0 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp1aQ921W0 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp1aQ921W0 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp1aQ921W0 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
Chmp1aQ921W0 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp1aQ921W0 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp1aQ921W0 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp1aQ921W0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp1aQ921W0 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp1aQ921W0 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp1aQ921W0 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp1aQ921W0 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.66■□□□□ 0.42
Chmp1aQ921W0 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chmp1aQ921W0 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp1aQ921W0 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp1aQ921W0 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp1aQ921W0 Gm14523-201ENSMUST00000117260 558 ntBASIC17.65■□□□□ 0.42
Chmp1aQ921W0 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Chmp1aQ921W0 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp1aQ921W0 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chmp1aQ921W0 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC17.65■□□□□ 0.42
Chmp1aQ921W0 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.65■□□□□ 0.42
Chmp1aQ921W0 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Chmp1aQ921W0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp1aQ921W0 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp1aQ921W0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Chmp1aQ921W0 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.64■□□□□ 0.41
Chmp1aQ921W0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.64■□□□□ 0.41
Chmp1aQ921W0 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
Chmp1aQ921W0 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chmp1aQ921W0 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Chmp1aQ921W0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.64■□□□□ 0.41
Chmp1aQ921W0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp1aQ921W0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp1aQ921W0 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp1aQ921W0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp1aQ921W0 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp1aQ921W0 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp1aQ921W0 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.63■□□□□ 0.41
Chmp1aQ921W0 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp1aQ921W0 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp1aQ921W0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC17.63■□□□□ 0.41
Chmp1aQ921W0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Chmp1aQ921W0 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp1aQ921W0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chmp1aQ921W0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC17.62■□□□□ 0.41
Chmp1aQ921W0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp1aQ921W0 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp1aQ921W0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Chmp1aQ921W0 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chmp1aQ921W0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.62■□□□□ 0.41
Chmp1aQ921W0 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Chmp1aQ921W0 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp1aQ921W0 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Chmp1aQ921W0 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp1aQ921W0 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Chmp1aQ921W0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp1aQ921W0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp1aQ921W0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp1aQ921W0 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
Chmp1aQ921W0 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chmp1aQ921W0 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms