Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha1Q91Y21 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha1Q91Y21 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Pcdha1Q91Y21 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha1Q91Y21 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC20.99■□□□□ 0.95
Pcdha1Q91Y21 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
Pcdha1Q91Y21 Gm8493-201ENSMUST00000196881 489 ntBASIC20.99■□□□□ 0.95
Pcdha1Q91Y21 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.99■□□□□ 0.95
Pcdha1Q91Y21 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Pcdha1Q91Y21 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha1Q91Y21 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha1Q91Y21 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Pcdha1Q91Y21 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha1Q91Y21 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha1Q91Y21 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Pcdha1Q91Y21 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha1Q91Y21 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha1Q91Y21 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha1Q91Y21 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha1Q91Y21 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha1Q91Y21 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha1Q91Y21 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha1Q91Y21 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha1Q91Y21 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.98■□□□□ 0.95
Pcdha1Q91Y21 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.98■□□□□ 0.95
Pcdha1Q91Y21 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha1Q91Y21 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha1Q91Y21 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha1Q91Y21 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.98■□□□□ 0.95
Pcdha1Q91Y21 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Pcdha1Q91Y21 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Pcdha1Q91Y21 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
Pcdha1Q91Y21 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Pcdha1Q91Y21 Gm43017-201ENSMUST00000198296 752 ntBASIC20.97■□□□□ 0.95
Pcdha1Q91Y21 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha1Q91Y21 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha1Q91Y21 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha1Q91Y21 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdha1Q91Y21 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha1Q91Y21 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha1Q91Y21 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha1Q91Y21 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha1Q91Y21 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.96■□□□□ 0.95
Pcdha1Q91Y21 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha1Q91Y21 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.96■□□□□ 0.95
Pcdha1Q91Y21 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
Pcdha1Q91Y21 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha1Q91Y21 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Pcdha1Q91Y21 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha1Q91Y21 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Pcdha1Q91Y21 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha1Q91Y21 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdha1Q91Y21 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC20.95■□□□□ 0.94
Pcdha1Q91Y21 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Pcdha1Q91Y21 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha1Q91Y21 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha1Q91Y21 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.95■□□□□ 0.94
Pcdha1Q91Y21 Gm12251-201ENSMUST00000117893 792 ntBASIC20.95■□□□□ 0.94
Pcdha1Q91Y21 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.95■□□□□ 0.94
Pcdha1Q91Y21 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.95■□□□□ 0.94
Pcdha1Q91Y21 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdha1Q91Y21 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Pcdha1Q91Y21 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha1Q91Y21 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha1Q91Y21 Gm43173-201ENSMUST00000202246 593 ntBASIC20.94■□□□□ 0.94
Pcdha1Q91Y21 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
Pcdha1Q91Y21 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha1Q91Y21 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha1Q91Y21 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha1Q91Y21 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdha1Q91Y21 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.94■□□□□ 0.94
Pcdha1Q91Y21 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdha1Q91Y21 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdha1Q91Y21 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdha1Q91Y21 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdha1Q91Y21 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdha1Q91Y21 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.93■□□□□ 0.94
Pcdha1Q91Y21 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Pcdha1Q91Y21 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdha1Q91Y21 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdha1Q91Y21 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Pcdha1Q91Y21 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha1Q91Y21 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.92■□□□□ 0.94
Pcdha1Q91Y21 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha1Q91Y21 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha1Q91Y21 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha1Q91Y21 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha1Q91Y21 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha1Q91Y21 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.92■□□□□ 0.94
Pcdha1Q91Y21 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha1Q91Y21 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdha1Q91Y21 Snhg20-203ENSMUST00000182811 2153 ntBASIC20.92■□□□□ 0.94
Pcdha1Q91Y21 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha1Q91Y21 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha1Q91Y21 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha1Q91Y21 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdha1Q91Y21 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Pcdha1Q91Y21 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.91■□□□□ 0.94
Pcdha1Q91Y21 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Pcdha1Q91Y21 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms