Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
Pcdha11Q91Y19 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha11Q91Y19 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha11Q91Y19 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Pcdha11Q91Y19 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha11Q91Y19 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha11Q91Y19 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha11Q91Y19 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha11Q91Y19 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Pcdha11Q91Y19 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Pcdha11Q91Y19 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
Pcdha11Q91Y19 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha11Q91Y19 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Pcdha11Q91Y19 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha11Q91Y19 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha11Q91Y19 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC21.17■□□□□ 0.98
Pcdha11Q91Y19 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha11Q91Y19 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha11Q91Y19 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC21.17■□□□□ 0.98
Pcdha11Q91Y19 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha11Q91Y19 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Pcdha11Q91Y19 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC21.16■□□□□ 0.98
Pcdha11Q91Y19 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha11Q91Y19 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha11Q91Y19 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha11Q91Y19 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC21.16■□□□□ 0.98
Pcdha11Q91Y19 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha11Q91Y19 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Pcdha11Q91Y19 Gm6277-202ENSMUST00000224036 2779 ntBASIC21.15■□□□□ 0.98
Pcdha11Q91Y19 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdha11Q91Y19 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Pcdha11Q91Y19 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
Pcdha11Q91Y19 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC21.15■□□□□ 0.98
Pcdha11Q91Y19 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdha11Q91Y19 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdha11Q91Y19 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Pcdha11Q91Y19 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Pcdha11Q91Y19 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdha11Q91Y19 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdha11Q91Y19 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdha11Q91Y19 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC21.14■□□□□ 0.97
Pcdha11Q91Y19 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
Pcdha11Q91Y19 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Pcdha11Q91Y19 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdha11Q91Y19 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC21.13■□□□□ 0.97
Pcdha11Q91Y19 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.13■□□□□ 0.97
Pcdha11Q91Y19 Mir7075-201ENSMUST00000184187 82 ntBASIC21.13■□□□□ 0.97
Pcdha11Q91Y19 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Pcdha11Q91Y19 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Pcdha11Q91Y19 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Pcdha11Q91Y19 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha11Q91Y19 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Pcdha11Q91Y19 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Pcdha11Q91Y19 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Pcdha11Q91Y19 Mir6236-201ENSMUST00000184437 123 ntBASIC21.11■□□□□ 0.97
Pcdha11Q91Y19 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha11Q91Y19 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha11Q91Y19 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha11Q91Y19 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Pcdha11Q91Y19 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Pcdha11Q91Y19 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha11Q91Y19 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha11Q91Y19 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC21.1■□□□□ 0.97
Pcdha11Q91Y19 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha11Q91Y19 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha11Q91Y19 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha11Q91Y19 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha11Q91Y19 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Pcdha11Q91Y19 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Pcdha11Q91Y19 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha11Q91Y19 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha11Q91Y19 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha11Q91Y19 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha11Q91Y19 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha11Q91Y19 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha11Q91Y19 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha11Q91Y19 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Pcdha11Q91Y19 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha11Q91Y19 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC21.08■□□□□ 0.97
Pcdha11Q91Y19 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha11Q91Y19 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha11Q91Y19 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Pcdha11Q91Y19 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha11Q91Y19 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha11Q91Y19 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
Pcdha11Q91Y19 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Pcdha11Q91Y19 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Pcdha11Q91Y19 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha11Q91Y19 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha11Q91Y19 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha11Q91Y19 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha11Q91Y19 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha11Q91Y19 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
Pcdha11Q91Y19 Gm6139-201ENSMUST00000079261 882 ntBASIC21.07■□□□□ 0.96
Pcdha11Q91Y19 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Pcdha11Q91Y19 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.07■□□□□ 0.96
Pcdha11Q91Y19 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha11Q91Y19 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha11Q91Y19 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Pcdha11Q91Y19 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms