Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Pcdhb1Q91Y08 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb1Q91Y08 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Pcdhb1Q91Y08 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb1Q91Y08 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb1Q91Y08 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb1Q91Y08 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb1Q91Y08 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb1Q91Y08 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcdhb1Q91Y08 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC20.96■□□□□ 0.95
Pcdhb1Q91Y08 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb1Q91Y08 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Pcdhb1Q91Y08 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Pcdhb1Q91Y08 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb1Q91Y08 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhb1Q91Y08 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb1Q91Y08 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.95■□□□□ 0.94
Pcdhb1Q91Y08 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb1Q91Y08 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb1Q91Y08 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb1Q91Y08 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Pcdhb1Q91Y08 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb1Q91Y08 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Pcdhb1Q91Y08 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb1Q91Y08 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb1Q91Y08 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb1Q91Y08 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Pcdhb1Q91Y08 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb1Q91Y08 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb1Q91Y08 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb1Q91Y08 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb1Q91Y08 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Pcdhb1Q91Y08 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb1Q91Y08 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhb1Q91Y08 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.93■□□□□ 0.94
Pcdhb1Q91Y08 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb1Q91Y08 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC20.93■□□□□ 0.94
Pcdhb1Q91Y08 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb1Q91Y08 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Pcdhb1Q91Y08 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhb1Q91Y08 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Pcdhb1Q91Y08 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Pcdhb1Q91Y08 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb1Q91Y08 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb1Q91Y08 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.92■□□□□ 0.94
Pcdhb1Q91Y08 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb1Q91Y08 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC20.92■□□□□ 0.94
Pcdhb1Q91Y08 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.92■□□□□ 0.94
Pcdhb1Q91Y08 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb1Q91Y08 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb1Q91Y08 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Pcdhb1Q91Y08 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.91■□□□□ 0.94
Pcdhb1Q91Y08 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb1Q91Y08 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb1Q91Y08 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb1Q91Y08 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb1Q91Y08 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb1Q91Y08 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb1Q91Y08 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Pcdhb1Q91Y08 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb1Q91Y08 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.9■□□□□ 0.94
Pcdhb1Q91Y08 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb1Q91Y08 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
Pcdhb1Q91Y08 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb1Q91Y08 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Pcdhb1Q91Y08 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb1Q91Y08 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb1Q91Y08 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Pcdhb1Q91Y08 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb1Q91Y08 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Pcdhb1Q91Y08 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Pcdhb1Q91Y08 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb1Q91Y08 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb1Q91Y08 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.89■□□□□ 0.93
Pcdhb1Q91Y08 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb1Q91Y08 Gm15039-201ENSMUST00000118914 875 ntBASIC20.89■□□□□ 0.93
Pcdhb1Q91Y08 Mir6236-201ENSMUST00000184437 123 ntBASIC20.89■□□□□ 0.93
Pcdhb1Q91Y08 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.89■□□□□ 0.93
Pcdhb1Q91Y08 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb1Q91Y08 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.89■□□□□ 0.93
Pcdhb1Q91Y08 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Pcdhb1Q91Y08 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
Pcdhb1Q91Y08 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb1Q91Y08 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb1Q91Y08 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb1Q91Y08 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.88■□□□□ 0.93
Pcdhb1Q91Y08 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb1Q91Y08 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb1Q91Y08 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb1Q91Y08 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Pcdhb1Q91Y08 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Pcdhb1Q91Y08 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb1Q91Y08 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.87■□□□□ 0.93
Pcdhb1Q91Y08 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Pcdhb1Q91Y08 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb1Q91Y08 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb1Q91Y08 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.87■□□□□ 0.93
Pcdhb1Q91Y08 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Pcdhb1Q91Y08 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.87■□□□□ 0.93
Pcdhb1Q91Y08 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms