Protein–RNA interactions for Protein: Q91Y06

Pcdhb13, Protocadherin beta 13, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb13Q91Y06 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb13Q91Y06 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Pcdhb13Q91Y06 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Pcdhb13Q91Y06 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.29■□□□□ 0.84
Pcdhb13Q91Y06 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb13Q91Y06 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb13Q91Y06 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb13Q91Y06 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
Pcdhb13Q91Y06 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb13Q91Y06 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb13Q91Y06 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb13Q91Y06 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb13Q91Y06 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb13Q91Y06 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb13Q91Y06 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.27■□□□□ 0.84
Pcdhb13Q91Y06 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
Pcdhb13Q91Y06 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb13Q91Y06 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb13Q91Y06 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb13Q91Y06 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb13Q91Y06 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Pcdhb13Q91Y06 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Pcdhb13Q91Y06 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC20.27■□□□□ 0.83
Pcdhb13Q91Y06 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb13Q91Y06 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.26■□□□□ 0.83
Pcdhb13Q91Y06 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb13Q91Y06 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb13Q91Y06 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.26■□□□□ 0.83
Pcdhb13Q91Y06 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb13Q91Y06 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb13Q91Y06 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Pcdhb13Q91Y06 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb13Q91Y06 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Pcdhb13Q91Y06 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb13Q91Y06 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.25■□□□□ 0.83
Pcdhb13Q91Y06 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.25■□□□□ 0.83
Pcdhb13Q91Y06 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb13Q91Y06 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.25■□□□□ 0.83
Pcdhb13Q91Y06 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC20.25■□□□□ 0.83
Pcdhb13Q91Y06 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC20.25■□□□□ 0.83
Pcdhb13Q91Y06 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pcdhb13Q91Y06 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb13Q91Y06 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb13Q91Y06 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Pcdhb13Q91Y06 Gm45102-201ENSMUST00000207427 857 ntBASIC20.24■□□□□ 0.83
Pcdhb13Q91Y06 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Pcdhb13Q91Y06 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb13Q91Y06 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb13Q91Y06 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pcdhb13Q91Y06 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb13Q91Y06 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.23■□□□□ 0.83
Pcdhb13Q91Y06 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb13Q91Y06 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.23■□□□□ 0.83
Pcdhb13Q91Y06 Gm22238-201ENSMUST00000175222 88 ntBASIC20.23■□□□□ 0.83
Pcdhb13Q91Y06 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb13Q91Y06 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb13Q91Y06 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.23■□□□□ 0.83
Pcdhb13Q91Y06 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcdhb13Q91Y06 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pcdhb13Q91Y06 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb13Q91Y06 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb13Q91Y06 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb13Q91Y06 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
Pcdhb13Q91Y06 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC20.22■□□□□ 0.83
Pcdhb13Q91Y06 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.22■□□□□ 0.83
Pcdhb13Q91Y06 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcdhb13Q91Y06 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb13Q91Y06 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb13Q91Y06 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb13Q91Y06 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcdhb13Q91Y06 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb13Q91Y06 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pcdhb13Q91Y06 Gm14117-201ENSMUST00000122417 843 ntBASIC20.21■□□□□ 0.83
Pcdhb13Q91Y06 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb13Q91Y06 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcdhb13Q91Y06 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.21■□□□□ 0.83
Pcdhb13Q91Y06 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb13Q91Y06 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcdhb13Q91Y06 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcdhb13Q91Y06 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb13Q91Y06 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhb13Q91Y06 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb13Q91Y06 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pcdhb13Q91Y06 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb13Q91Y06 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.2■□□□□ 0.82
Pcdhb13Q91Y06 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.2■□□□□ 0.82
Pcdhb13Q91Y06 Rps24-207ENSMUST00000224568 714 ntBASIC20.2■□□□□ 0.82
Pcdhb13Q91Y06 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcdhb13Q91Y06 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb13Q91Y06 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.19■□□□□ 0.82
Pcdhb13Q91Y06 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb13Q91Y06 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.19■□□□□ 0.82
Pcdhb13Q91Y06 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Pcdhb13Q91Y06 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb13Q91Y06 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb13Q91Y06 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pcdhb13Q91Y06 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC20.19■□□□□ 0.82
Pcdhb13Q91Y06 Gm43530-201ENSMUST00000195920 274 ntBASIC20.19■□□□□ 0.82
Pcdhb13Q91Y06 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Pcdhb13Q91Y06 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms