Protein–RNA interactions for Protein: Q91XZ5

Pcdhb5, Protocadherin beta 5, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb5Q91XZ5 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhb5Q91XZ5 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhb5Q91XZ5 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhb5Q91XZ5 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhb5Q91XZ5 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC23.87■■□□□ 1.41
Pcdhb5Q91XZ5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb5Q91XZ5 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC23.86■■□□□ 1.41
Pcdhb5Q91XZ5 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb5Q91XZ5 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
Pcdhb5Q91XZ5 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb5Q91XZ5 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb5Q91XZ5 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb5Q91XZ5 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb5Q91XZ5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb5Q91XZ5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb5Q91XZ5 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb5Q91XZ5 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Pcdhb5Q91XZ5 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb5Q91XZ5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb5Q91XZ5 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb5Q91XZ5 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhb5Q91XZ5 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhb5Q91XZ5 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhb5Q91XZ5 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhb5Q91XZ5 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhb5Q91XZ5 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Pcdhb5Q91XZ5 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhb5Q91XZ5 Gm11421-201ENSMUST00000122124 294 ntBASIC23.84■■□□□ 1.41
Pcdhb5Q91XZ5 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC23.84■■□□□ 1.41
Pcdhb5Q91XZ5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhb5Q91XZ5 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC23.83■■□□□ 1.41
Pcdhb5Q91XZ5 Gm26766-202ENSMUST00000227544 2347 ntBASIC23.83■■□□□ 1.41
Pcdhb5Q91XZ5 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhb5Q91XZ5 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhb5Q91XZ5 Gm27405-201ENSMUST00000184201 112 ntBASIC23.83■■□□□ 1.41
Pcdhb5Q91XZ5 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdhb5Q91XZ5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb5Q91XZ5 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb5Q91XZ5 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb5Q91XZ5 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb5Q91XZ5 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb5Q91XZ5 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb5Q91XZ5 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb5Q91XZ5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Pcdhb5Q91XZ5 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb5Q91XZ5 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb5Q91XZ5 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC23.81■■□□□ 1.4
Pcdhb5Q91XZ5 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
Pcdhb5Q91XZ5 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb5Q91XZ5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb5Q91XZ5 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb5Q91XZ5 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb5Q91XZ5 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Pcdhb5Q91XZ5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb5Q91XZ5 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb5Q91XZ5 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC23.8■■□□□ 1.4
Pcdhb5Q91XZ5 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb5Q91XZ5 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb5Q91XZ5 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb5Q91XZ5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Pcdhb5Q91XZ5 AC122428.2-201ENSMUST00000216321 1832 ntBASIC23.8■■□□□ 1.4
Pcdhb5Q91XZ5 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb5Q91XZ5 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb5Q91XZ5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb5Q91XZ5 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC23.79■■□□□ 1.4
Pcdhb5Q91XZ5 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Pcdhb5Q91XZ5 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC23.78■■□□□ 1.4
Pcdhb5Q91XZ5 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC23.78■■□□□ 1.4
Pcdhb5Q91XZ5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Pcdhb5Q91XZ5 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhb5Q91XZ5 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhb5Q91XZ5 Gm10849-201ENSMUST00000100397 618 ntBASIC23.78■■□□□ 1.4
Pcdhb5Q91XZ5 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC23.78■■□□□ 1.4
Pcdhb5Q91XZ5 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
Pcdhb5Q91XZ5 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC23.78■■□□□ 1.4
Pcdhb5Q91XZ5 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Pcdhb5Q91XZ5 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhb5Q91XZ5 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhb5Q91XZ5 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhb5Q91XZ5 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhb5Q91XZ5 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC23.77■■□□□ 1.4
Pcdhb5Q91XZ5 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC23.77■■□□□ 1.4
Pcdhb5Q91XZ5 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhb5Q91XZ5 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Pcdhb5Q91XZ5 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
Pcdhb5Q91XZ5 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb5Q91XZ5 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC23.76■■□□□ 1.39
Pcdhb5Q91XZ5 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb5Q91XZ5 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC23.76■■□□□ 1.39
Pcdhb5Q91XZ5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Pcdhb5Q91XZ5 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb5Q91XZ5 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb5Q91XZ5 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb5Q91XZ5 Gm18671-201ENSMUST00000214826 683 ntBASIC23.75■■□□□ 1.39
Pcdhb5Q91XZ5 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC23.75■■□□□ 1.39
Pcdhb5Q91XZ5 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
Pcdhb5Q91XZ5 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb5Q91XZ5 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Pcdhb5Q91XZ5 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Pcdhb5Q91XZ5 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Retrieved 100 of 76,532 protein–RNA pairs in 67.5 ms