Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
Pcdhb6Q91XZ4 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb6Q91XZ4 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb6Q91XZ4 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.75■□□□□ 0.91
Pcdhb6Q91XZ4 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC20.75■□□□□ 0.91
Pcdhb6Q91XZ4 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb6Q91XZ4 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pcdhb6Q91XZ4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb6Q91XZ4 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Pcdhb6Q91XZ4 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb6Q91XZ4 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Pcdhb6Q91XZ4 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcdhb6Q91XZ4 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb6Q91XZ4 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb6Q91XZ4 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC20.74■□□□□ 0.91
Pcdhb6Q91XZ4 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb6Q91XZ4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
Pcdhb6Q91XZ4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcdhb6Q91XZ4 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.74■□□□□ 0.91
Pcdhb6Q91XZ4 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb6Q91XZ4 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pcdhb6Q91XZ4 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb6Q91XZ4 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb6Q91XZ4 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb6Q91XZ4 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Pcdhb6Q91XZ4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb6Q91XZ4 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb6Q91XZ4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb6Q91XZ4 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pcdhb6Q91XZ4 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Pcdhb6Q91XZ4 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC20.72■□□□□ 0.91
Pcdhb6Q91XZ4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb6Q91XZ4 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb6Q91XZ4 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb6Q91XZ4 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pcdhb6Q91XZ4 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb6Q91XZ4 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb6Q91XZ4 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb6Q91XZ4 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.71■□□□□ 0.91
Pcdhb6Q91XZ4 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.71■□□□□ 0.91
Pcdhb6Q91XZ4 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb6Q91XZ4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb6Q91XZ4 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb6Q91XZ4 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb6Q91XZ4 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Pcdhb6Q91XZ4 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
Pcdhb6Q91XZ4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.7■□□□□ 0.9
Pcdhb6Q91XZ4 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb6Q91XZ4 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb6Q91XZ4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb6Q91XZ4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC20.7■□□□□ 0.9
Pcdhb6Q91XZ4 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb6Q91XZ4 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Pcdhb6Q91XZ4 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Pcdhb6Q91XZ4 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
Pcdhb6Q91XZ4 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Pcdhb6Q91XZ4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb6Q91XZ4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.69■□□□□ 0.9
Pcdhb6Q91XZ4 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.69■□□□□ 0.9
Pcdhb6Q91XZ4 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.69■□□□□ 0.9
Pcdhb6Q91XZ4 Mir6236-201ENSMUST00000184437 123 ntBASIC20.69■□□□□ 0.9
Pcdhb6Q91XZ4 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Pcdhb6Q91XZ4 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb6Q91XZ4 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Pcdhb6Q91XZ4 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb6Q91XZ4 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC20.68■□□□□ 0.9
Pcdhb6Q91XZ4 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Pcdhb6Q91XZ4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Pcdhb6Q91XZ4 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb6Q91XZ4 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb6Q91XZ4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb6Q91XZ4 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb6Q91XZ4 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.67■□□□□ 0.9
Pcdhb6Q91XZ4 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb6Q91XZ4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb6Q91XZ4 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb6Q91XZ4 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Pcdhb6Q91XZ4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb6Q91XZ4 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
Pcdhb6Q91XZ4 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb6Q91XZ4 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.66■□□□□ 0.9
Pcdhb6Q91XZ4 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb6Q91XZ4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb6Q91XZ4 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Pcdhb6Q91XZ4 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
Pcdhb6Q91XZ4 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pcdhb6Q91XZ4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb6Q91XZ4 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb6Q91XZ4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb6Q91XZ4 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb6Q91XZ4 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhb6Q91XZ4 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC20.64■□□□□ 0.9
Pcdhb6Q91XZ4 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhb6Q91XZ4 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
Pcdhb6Q91XZ4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.64■□□□□ 0.9
Pcdhb6Q91XZ4 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC20.64■□□□□ 0.89
Pcdhb6Q91XZ4 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb6Q91XZ4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb6Q91XZ4 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb6Q91XZ4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 58.7 ms