Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga11Q91XY8 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdhga11Q91XY8 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdhga11Q91XY8 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.33■□□□□ 0.69
Pcdhga11Q91XY8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Pcdhga11Q91XY8 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhga11Q91XY8 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.33■□□□□ 0.69
Pcdhga11Q91XY8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhga11Q91XY8 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhga11Q91XY8 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdhga11Q91XY8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga11Q91XY8 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga11Q91XY8 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Pcdhga11Q91XY8 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga11Q91XY8 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga11Q91XY8 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.33■□□□□ 0.68
Pcdhga11Q91XY8 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga11Q91XY8 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.33■□□□□ 0.68
Pcdhga11Q91XY8 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdhga11Q91XY8 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Pcdhga11Q91XY8 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Pcdhga11Q91XY8 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga11Q91XY8 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga11Q91XY8 Etf1-202ENSMUST00000180351 108 ntBASIC19.32■□□□□ 0.68
Pcdhga11Q91XY8 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga11Q91XY8 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga11Q91XY8 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga11Q91XY8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga11Q91XY8 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdhga11Q91XY8 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.32■□□□□ 0.68
Pcdhga11Q91XY8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.32■□□□□ 0.68
Pcdhga11Q91XY8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga11Q91XY8 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga11Q91XY8 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga11Q91XY8 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga11Q91XY8 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.31■□□□□ 0.68
Pcdhga11Q91XY8 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga11Q91XY8 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdhga11Q91XY8 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Pcdhga11Q91XY8 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Pcdhga11Q91XY8 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga11Q91XY8 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Pcdhga11Q91XY8 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga11Q91XY8 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga11Q91XY8 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Pcdhga11Q91XY8 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhga11Q91XY8 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.3■□□□□ 0.68
Pcdhga11Q91XY8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhga11Q91XY8 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga11Q91XY8 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Pcdhga11Q91XY8 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga11Q91XY8 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga11Q91XY8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga11Q91XY8 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga11Q91XY8 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga11Q91XY8 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga11Q91XY8 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.29■□□□□ 0.68
Pcdhga11Q91XY8 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga11Q91XY8 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga11Q91XY8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga11Q91XY8 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Pcdhga11Q91XY8 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga11Q91XY8 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga11Q91XY8 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga11Q91XY8 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga11Q91XY8 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga11Q91XY8 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga11Q91XY8 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga11Q91XY8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Pcdhga11Q91XY8 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Pcdhga11Q91XY8 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga11Q91XY8 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga11Q91XY8 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga11Q91XY8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga11Q91XY8 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga11Q91XY8 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga11Q91XY8 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
Pcdhga11Q91XY8 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.27■□□□□ 0.68
Pcdhga11Q91XY8 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga11Q91XY8 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Pcdhga11Q91XY8 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Pcdhga11Q91XY8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga11Q91XY8 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga11Q91XY8 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga11Q91XY8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhga11Q91XY8 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga11Q91XY8 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga11Q91XY8 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga11Q91XY8 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Pcdhga11Q91XY8 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga11Q91XY8 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Pcdhga11Q91XY8 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC19.25■□□□□ 0.67
Pcdhga11Q91XY8 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga11Q91XY8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga11Q91XY8 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga11Q91XY8 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga11Q91XY8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga11Q91XY8 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga11Q91XY8 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Pcdhga11Q91XY8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms