Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lims2Q91XD2 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lims2Q91XD2 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Lims2Q91XD2 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lims2Q91XD2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lims2Q91XD2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.79■□□□□ 0.92
Lims2Q91XD2 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Lims2Q91XD2 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Lims2Q91XD2 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lims2Q91XD2 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lims2Q91XD2 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.78■□□□□ 0.92
Lims2Q91XD2 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lims2Q91XD2 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Lims2Q91XD2 Gm43173-201ENSMUST00000202246 593 ntBASIC20.78■□□□□ 0.92
Lims2Q91XD2 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Lims2Q91XD2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Lims2Q91XD2 Gm10209-201ENSMUST00000203397 1607 ntBASIC20.78■□□□□ 0.92
Lims2Q91XD2 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Lims2Q91XD2 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.77■□□□□ 0.92
Lims2Q91XD2 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lims2Q91XD2 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lims2Q91XD2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lims2Q91XD2 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lims2Q91XD2 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC20.77■□□□□ 0.92
Lims2Q91XD2 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lims2Q91XD2 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Lims2Q91XD2 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lims2Q91XD2 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lims2Q91XD2 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
Lims2Q91XD2 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Lims2Q91XD2 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Lims2Q91XD2 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
Lims2Q91XD2 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lims2Q91XD2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lims2Q91XD2 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lims2Q91XD2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Lims2Q91XD2 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC20.76■□□□□ 0.91
Lims2Q91XD2 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lims2Q91XD2 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lims2Q91XD2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lims2Q91XD2 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC20.76■□□□□ 0.91
Lims2Q91XD2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Lims2Q91XD2 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Lims2Q91XD2 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lims2Q91XD2 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.75■□□□□ 0.91
Lims2Q91XD2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lims2Q91XD2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Lims2Q91XD2 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Lims2Q91XD2 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lims2Q91XD2 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.74■□□□□ 0.91
Lims2Q91XD2 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Lims2Q91XD2 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.74■□□□□ 0.91
Lims2Q91XD2 Gm7160-202ENSMUST00000188519 1027 ntBASIC20.74■□□□□ 0.91
Lims2Q91XD2 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lims2Q91XD2 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lims2Q91XD2 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.74■□□□□ 0.91
Lims2Q91XD2 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Lims2Q91XD2 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Lims2Q91XD2 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.74■□□□□ 0.91
Lims2Q91XD2 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Lims2Q91XD2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Lims2Q91XD2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lims2Q91XD2 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC20.73■□□□□ 0.91
Lims2Q91XD2 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Lims2Q91XD2 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Lims2Q91XD2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lims2Q91XD2 Gm8493-201ENSMUST00000196881 489 ntBASIC20.72■□□□□ 0.91
Lims2Q91XD2 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lims2Q91XD2 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Lims2Q91XD2 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lims2Q91XD2 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lims2Q91XD2 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC20.71■□□□□ 0.91
Lims2Q91XD2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Lims2Q91XD2 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.71■□□□□ 0.91
Lims2Q91XD2 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lims2Q91XD2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Lims2Q91XD2 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lims2Q91XD2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lims2Q91XD2 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.7■□□□□ 0.9
Lims2Q91XD2 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lims2Q91XD2 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lims2Q91XD2 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lims2Q91XD2 Gm15039-201ENSMUST00000118914 875 ntBASIC20.7■□□□□ 0.9
Lims2Q91XD2 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.7■□□□□ 0.9
Lims2Q91XD2 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lims2Q91XD2 Serp2-204ENSMUST00000228055 705 ntBASIC20.7■□□□□ 0.9
Lims2Q91XD2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lims2Q91XD2 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lims2Q91XD2 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.7■□□□□ 0.9
Lims2Q91XD2 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Lims2Q91XD2 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lims2Q91XD2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lims2Q91XD2 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Lims2Q91XD2 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Lims2Q91XD2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lims2Q91XD2 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Lims2Q91XD2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC20.69■□□□□ 0.9
Lims2Q91XD2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Lims2Q91XD2 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Lims2Q91XD2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms