Protein–RNA interactions for Protein: Q91UZ8

Pcdhb11, MCG141285, mousemouse

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb11Q91UZ8 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Pcdhb11Q91UZ8 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb11Q91UZ8 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhb11Q91UZ8 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Pcdhb11Q91UZ8 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.64■□□□□ 0.89
Pcdhb11Q91UZ8 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.64■□□□□ 0.89
Pcdhb11Q91UZ8 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb11Q91UZ8 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb11Q91UZ8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb11Q91UZ8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb11Q91UZ8 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb11Q91UZ8 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb11Q91UZ8 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb11Q91UZ8 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb11Q91UZ8 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb11Q91UZ8 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Pcdhb11Q91UZ8 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Pcdhb11Q91UZ8 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb11Q91UZ8 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Pcdhb11Q91UZ8 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb11Q91UZ8 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb11Q91UZ8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Pcdhb11Q91UZ8 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Pcdhb11Q91UZ8 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb11Q91UZ8 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb11Q91UZ8 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb11Q91UZ8 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb11Q91UZ8 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Pcdhb11Q91UZ8 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb11Q91UZ8 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb11Q91UZ8 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb11Q91UZ8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb11Q91UZ8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.61■□□□□ 0.89
Pcdhb11Q91UZ8 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb11Q91UZ8 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb11Q91UZ8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb11Q91UZ8 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb11Q91UZ8 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pcdhb11Q91UZ8 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb11Q91UZ8 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb11Q91UZ8 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb11Q91UZ8 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb11Q91UZ8 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb11Q91UZ8 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Pcdhb11Q91UZ8 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb11Q91UZ8 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC20.59■□□□□ 0.89
Pcdhb11Q91UZ8 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb11Q91UZ8 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb11Q91UZ8 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb11Q91UZ8 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Pcdhb11Q91UZ8 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb11Q91UZ8 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb11Q91UZ8 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
Pcdhb11Q91UZ8 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Pcdhb11Q91UZ8 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC20.58■□□□□ 0.88
Pcdhb11Q91UZ8 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb11Q91UZ8 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.57■□□□□ 0.88
Pcdhb11Q91UZ8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb11Q91UZ8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb11Q91UZ8 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb11Q91UZ8 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb11Q91UZ8 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb11Q91UZ8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb11Q91UZ8 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Pcdhb11Q91UZ8 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb11Q91UZ8 Gm21956-201ENSMUST00000179946 522 ntBASIC20.56■□□□□ 0.88
Pcdhb11Q91UZ8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC20.56■□□□□ 0.88
Pcdhb11Q91UZ8 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb11Q91UZ8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb11Q91UZ8 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb11Q91UZ8 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Pcdhb11Q91UZ8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb11Q91UZ8 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Pcdhb11Q91UZ8 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb11Q91UZ8 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Pcdhb11Q91UZ8 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb11Q91UZ8 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb11Q91UZ8 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb11Q91UZ8 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb11Q91UZ8 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb11Q91UZ8 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Pcdhb11Q91UZ8 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb11Q91UZ8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb11Q91UZ8 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.54■□□□□ 0.88
Pcdhb11Q91UZ8 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb11Q91UZ8 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.54■□□□□ 0.88
Pcdhb11Q91UZ8 Gm13241-201ENSMUST00000094493 780 ntBASIC20.54■□□□□ 0.88
Pcdhb11Q91UZ8 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb11Q91UZ8 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb11Q91UZ8 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.54■□□□□ 0.88
Pcdhb11Q91UZ8 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb11Q91UZ8 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Pcdhb11Q91UZ8 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb11Q91UZ8 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb11Q91UZ8 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb11Q91UZ8 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.53■□□□□ 0.88
Pcdhb11Q91UZ8 AC152827.1-201ENSMUST00000221143 2189 ntBASIC20.53■□□□□ 0.88
Pcdhb11Q91UZ8 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb11Q91UZ8 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Pcdhb11Q91UZ8 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 55.8 ms