Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
StrcQ8VIM6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
StrcQ8VIM6 AC153962.1-201ENSMUST00000218530 1948 ntBASIC24.72■■□□□ 1.55
StrcQ8VIM6 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
StrcQ8VIM6 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
StrcQ8VIM6 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
StrcQ8VIM6 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC24.72■■□□□ 1.55
StrcQ8VIM6 Gm42555-201ENSMUST00000199304 1039 ntBASIC24.72■■□□□ 1.55
StrcQ8VIM6 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
StrcQ8VIM6 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
StrcQ8VIM6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
StrcQ8VIM6 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
StrcQ8VIM6 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC24.71■■□□□ 1.55
StrcQ8VIM6 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC24.71■■□□□ 1.55
StrcQ8VIM6 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC24.71■■□□□ 1.55
StrcQ8VIM6 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
StrcQ8VIM6 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
StrcQ8VIM6 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
StrcQ8VIM6 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
StrcQ8VIM6 AC164883.3-201ENSMUST00000227396 1774 ntBASIC24.7■■□□□ 1.54
StrcQ8VIM6 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
StrcQ8VIM6 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
StrcQ8VIM6 Nfkbid-203ENSMUST00000108176 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
StrcQ8VIM6 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC24.7■■□□□ 1.54
StrcQ8VIM6 Gm42418-201ENSMUST00000182010 1831 ntBASIC24.69■■□□□ 1.54
StrcQ8VIM6 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
StrcQ8VIM6 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
StrcQ8VIM6 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
StrcQ8VIM6 Mir5133-201ENSMUST00000174955 77 ntBASIC24.69■■□□□ 1.54
StrcQ8VIM6 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
StrcQ8VIM6 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC24.69■■□□□ 1.54
StrcQ8VIM6 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
StrcQ8VIM6 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
StrcQ8VIM6 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
StrcQ8VIM6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
StrcQ8VIM6 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
StrcQ8VIM6 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
StrcQ8VIM6 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC24.68■■□□□ 1.54
StrcQ8VIM6 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
StrcQ8VIM6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
StrcQ8VIM6 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
StrcQ8VIM6 Gm12527-201ENSMUST00000117967 564 ntBASIC24.67■■□□□ 1.54
StrcQ8VIM6 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC24.67■■□□□ 1.54
StrcQ8VIM6 Gm7514-201ENSMUST00000209475 934 ntBASIC24.67■■□□□ 1.54
StrcQ8VIM6 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
StrcQ8VIM6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
StrcQ8VIM6 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC24.67■■□□□ 1.54
StrcQ8VIM6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
StrcQ8VIM6 Gm10252-201ENSMUST00000209541 832 ntBASIC24.66■■□□□ 1.54
StrcQ8VIM6 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
StrcQ8VIM6 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
StrcQ8VIM6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
StrcQ8VIM6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
StrcQ8VIM6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
StrcQ8VIM6 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
StrcQ8VIM6 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC24.65■■□□□ 1.54
StrcQ8VIM6 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
StrcQ8VIM6 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
StrcQ8VIM6 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
StrcQ8VIM6 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
StrcQ8VIM6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
StrcQ8VIM6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.53
StrcQ8VIM6 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
StrcQ8VIM6 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC24.63■■□□□ 1.53
StrcQ8VIM6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
StrcQ8VIM6 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
StrcQ8VIM6 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
StrcQ8VIM6 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC24.63■■□□□ 1.53
StrcQ8VIM6 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC24.63■■□□□ 1.53
StrcQ8VIM6 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
StrcQ8VIM6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
StrcQ8VIM6 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
StrcQ8VIM6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
StrcQ8VIM6 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
StrcQ8VIM6 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
StrcQ8VIM6 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC24.62■■□□□ 1.53
StrcQ8VIM6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
StrcQ8VIM6 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
StrcQ8VIM6 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
StrcQ8VIM6 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
StrcQ8VIM6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC24.62■■□□□ 1.53
StrcQ8VIM6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
StrcQ8VIM6 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
StrcQ8VIM6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
StrcQ8VIM6 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
StrcQ8VIM6 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
StrcQ8VIM6 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC24.62■■□□□ 1.53
StrcQ8VIM6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
StrcQ8VIM6 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
StrcQ8VIM6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
StrcQ8VIM6 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
StrcQ8VIM6 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC24.6■■□□□ 1.53
StrcQ8VIM6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
StrcQ8VIM6 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
StrcQ8VIM6 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
StrcQ8VIM6 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
StrcQ8VIM6 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC24.59■■□□□ 1.53
StrcQ8VIM6 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
StrcQ8VIM6 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
StrcQ8VIM6 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Retrieved 100 of 76,532 protein–RNA pairs in 11.8 ms