Protein–RNA interactions for Protein: Q8VE28

Nkd2, Protein naked cuticle homolog 2, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd2Q8VE28 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
Nkd2Q8VE28 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Nkd2Q8VE28 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC18.26■□□□□ 0.51
Nkd2Q8VE28 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkd2Q8VE28 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkd2Q8VE28 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkd2Q8VE28 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkd2Q8VE28 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkd2Q8VE28 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkd2Q8VE28 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkd2Q8VE28 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC18.25■□□□□ 0.51
Nkd2Q8VE28 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Nkd2Q8VE28 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Nkd2Q8VE28 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Nkd2Q8VE28 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC18.24■□□□□ 0.51
Nkd2Q8VE28 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkd2Q8VE28 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
Nkd2Q8VE28 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Nkd2Q8VE28 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkd2Q8VE28 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Nkd2Q8VE28 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Nkd2Q8VE28 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Nkd2Q8VE28 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkd2Q8VE28 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nkd2Q8VE28 Snhg20-203ENSMUST00000182811 2153 ntBASIC18.23■□□□□ 0.51
Nkd2Q8VE28 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
Nkd2Q8VE28 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nkd2Q8VE28 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
Nkd2Q8VE28 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Nkd2Q8VE28 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC18.23■□□□□ 0.51
Nkd2Q8VE28 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC18.23■□□□□ 0.51
Nkd2Q8VE28 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.23■□□□□ 0.51
Nkd2Q8VE28 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
Nkd2Q8VE28 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkd2Q8VE28 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkd2Q8VE28 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.23■□□□□ 0.51
Nkd2Q8VE28 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Nkd2Q8VE28 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.22■□□□□ 0.51
Nkd2Q8VE28 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkd2Q8VE28 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC18.22■□□□□ 0.51
Nkd2Q8VE28 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkd2Q8VE28 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkd2Q8VE28 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Nkd2Q8VE28 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Nkd2Q8VE28 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkd2Q8VE28 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkd2Q8VE28 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nkd2Q8VE28 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkd2Q8VE28 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC18.21■□□□□ 0.51
Nkd2Q8VE28 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Nkd2Q8VE28 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkd2Q8VE28 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Nkd2Q8VE28 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Nkd2Q8VE28 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkd2Q8VE28 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkd2Q8VE28 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkd2Q8VE28 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkd2Q8VE28 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkd2Q8VE28 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkd2Q8VE28 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkd2Q8VE28 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkd2Q8VE28 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Nkd2Q8VE28 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkd2Q8VE28 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkd2Q8VE28 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkd2Q8VE28 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkd2Q8VE28 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Nkd2Q8VE28 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkd2Q8VE28 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkd2Q8VE28 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Nkd2Q8VE28 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkd2Q8VE28 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkd2Q8VE28 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkd2Q8VE28 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkd2Q8VE28 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Nkd2Q8VE28 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkd2Q8VE28 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nkd2Q8VE28 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Nkd2Q8VE28 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Nkd2Q8VE28 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Nkd2Q8VE28 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Nkd2Q8VE28 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC18.19■□□□□ 0.5
Nkd2Q8VE28 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkd2Q8VE28 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nkd2Q8VE28 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nkd2Q8VE28 Gm9207-201ENSMUST00000198773 1115 ntBASIC18.18■□□□□ 0.5
Nkd2Q8VE28 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkd2Q8VE28 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkd2Q8VE28 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkd2Q8VE28 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Nkd2Q8VE28 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Nkd2Q8VE28 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkd2Q8VE28 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkd2Q8VE28 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Nkd2Q8VE28 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkd2Q8VE28 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Nkd2Q8VE28 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkd2Q8VE28 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Nkd2Q8VE28 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Nkd2Q8VE28 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms