Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Sgms1Q8VCQ6 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.08
Sgms1Q8VCQ6 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Sgms1Q8VCQ6 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sgms1Q8VCQ6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
Sgms1Q8VCQ6 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.82■■□□□ 1.08
Sgms1Q8VCQ6 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Sgms1Q8VCQ6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sgms1Q8VCQ6 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC21.82■■□□□ 1.08
Sgms1Q8VCQ6 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sgms1Q8VCQ6 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sgms1Q8VCQ6 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Sgms1Q8VCQ6 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sgms1Q8VCQ6 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.81■■□□□ 1.08
Sgms1Q8VCQ6 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Sgms1Q8VCQ6 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC21.81■■□□□ 1.08
Sgms1Q8VCQ6 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Sgms1Q8VCQ6 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sgms1Q8VCQ6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Sgms1Q8VCQ6 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sgms1Q8VCQ6 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sgms1Q8VCQ6 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.8■■□□□ 1.08
Sgms1Q8VCQ6 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC21.8■■□□□ 1.08
Sgms1Q8VCQ6 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC21.8■■□□□ 1.08
Sgms1Q8VCQ6 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Sgms1Q8VCQ6 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sgms1Q8VCQ6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sgms1Q8VCQ6 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Sgms1Q8VCQ6 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Sgms1Q8VCQ6 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sgms1Q8VCQ6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sgms1Q8VCQ6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sgms1Q8VCQ6 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
Sgms1Q8VCQ6 Gm22238-201ENSMUST00000175222 88 ntBASIC21.79■■□□□ 1.08
Sgms1Q8VCQ6 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.79■■□□□ 1.08
Sgms1Q8VCQ6 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sgms1Q8VCQ6 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sgms1Q8VCQ6 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Sgms1Q8VCQ6 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Sgms1Q8VCQ6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sgms1Q8VCQ6 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sgms1Q8VCQ6 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21.78■■□□□ 1.08
Sgms1Q8VCQ6 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
Sgms1Q8VCQ6 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sgms1Q8VCQ6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Sgms1Q8VCQ6 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sgms1Q8VCQ6 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sgms1Q8VCQ6 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
Sgms1Q8VCQ6 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Sgms1Q8VCQ6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Sgms1Q8VCQ6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.08
Sgms1Q8VCQ6 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Sgms1Q8VCQ6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC21.77■■□□□ 1.08
Sgms1Q8VCQ6 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC21.77■■□□□ 1.08
Sgms1Q8VCQ6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.77■■□□□ 1.08
Sgms1Q8VCQ6 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sgms1Q8VCQ6 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sgms1Q8VCQ6 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sgms1Q8VCQ6 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Sgms1Q8VCQ6 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Sgms1Q8VCQ6 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sgms1Q8VCQ6 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC21.76■■□□□ 1.07
Sgms1Q8VCQ6 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sgms1Q8VCQ6 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sgms1Q8VCQ6 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sgms1Q8VCQ6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Sgms1Q8VCQ6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sgms1Q8VCQ6 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sgms1Q8VCQ6 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Sgms1Q8VCQ6 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sgms1Q8VCQ6 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC21.75■■□□□ 1.07
Sgms1Q8VCQ6 Mir6236-201ENSMUST00000184437 123 ntBASIC21.75■■□□□ 1.07
Sgms1Q8VCQ6 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Sgms1Q8VCQ6 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Sgms1Q8VCQ6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Sgms1Q8VCQ6 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Sgms1Q8VCQ6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC21.74■■□□□ 1.07
Sgms1Q8VCQ6 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sgms1Q8VCQ6 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.74■■□□□ 1.07
Sgms1Q8VCQ6 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC21.74■■□□□ 1.07
Sgms1Q8VCQ6 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sgms1Q8VCQ6 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sgms1Q8VCQ6 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC21.74■■□□□ 1.07
Sgms1Q8VCQ6 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Sgms1Q8VCQ6 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sgms1Q8VCQ6 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sgms1Q8VCQ6 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Sgms1Q8VCQ6 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Sgms1Q8VCQ6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sgms1Q8VCQ6 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sgms1Q8VCQ6 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sgms1Q8VCQ6 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
Sgms1Q8VCQ6 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sgms1Q8VCQ6 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sgms1Q8VCQ6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sgms1Q8VCQ6 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Sgms1Q8VCQ6 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Sgms1Q8VCQ6 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Sgms1Q8VCQ6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Sgms1Q8VCQ6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms