Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Lsm1Q8VC85 Golph3-202ENSMUST00000226517 2359 ntBASIC19.32■□□□□ 0.68
Lsm1Q8VC85 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.32■□□□□ 0.68
Lsm1Q8VC85 Gm7143-201ENSMUST00000222811 859 ntBASIC19.32■□□□□ 0.68
Lsm1Q8VC85 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm1Q8VC85 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm1Q8VC85 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Lsm1Q8VC85 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm1Q8VC85 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm1Q8VC85 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Lsm1Q8VC85 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm1Q8VC85 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.31■□□□□ 0.68
Lsm1Q8VC85 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm1Q8VC85 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm1Q8VC85 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm1Q8VC85 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm1Q8VC85 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Lsm1Q8VC85 Gm40881-201ENSMUST00000223397 166 ntBASIC19.31■□□□□ 0.68
Lsm1Q8VC85 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm1Q8VC85 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm1Q8VC85 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Lsm1Q8VC85 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm1Q8VC85 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Lsm1Q8VC85 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Lsm1Q8VC85 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Lsm1Q8VC85 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.3■□□□□ 0.68
Lsm1Q8VC85 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Lsm1Q8VC85 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.3■□□□□ 0.68
Lsm1Q8VC85 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.3■□□□□ 0.68
Lsm1Q8VC85 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm1Q8VC85 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm1Q8VC85 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Lsm1Q8VC85 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm1Q8VC85 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm1Q8VC85 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Lsm1Q8VC85 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm1Q8VC85 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm1Q8VC85 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm1Q8VC85 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm1Q8VC85 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm1Q8VC85 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Lsm1Q8VC85 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Lsm1Q8VC85 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm1Q8VC85 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm1Q8VC85 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Lsm1Q8VC85 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm1Q8VC85 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lsm1Q8VC85 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm1Q8VC85 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.28■□□□□ 0.68
Lsm1Q8VC85 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm1Q8VC85 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm1Q8VC85 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm1Q8VC85 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm1Q8VC85 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm1Q8VC85 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Lsm1Q8VC85 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Lsm1Q8VC85 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Lsm1Q8VC85 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Lsm1Q8VC85 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm1Q8VC85 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm1Q8VC85 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm1Q8VC85 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm1Q8VC85 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.68
Lsm1Q8VC85 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Lsm1Q8VC85 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lsm1Q8VC85 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lsm1Q8VC85 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Lsm1Q8VC85 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm1Q8VC85 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm1Q8VC85 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm1Q8VC85 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm1Q8VC85 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Lsm1Q8VC85 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm1Q8VC85 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm1Q8VC85 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Lsm1Q8VC85 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm1Q8VC85 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm1Q8VC85 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm1Q8VC85 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm1Q8VC85 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Lsm1Q8VC85 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lsm1Q8VC85 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lsm1Q8VC85 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm1Q8VC85 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm1Q8VC85 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.25■□□□□ 0.67
Lsm1Q8VC85 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Lsm1Q8VC85 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Lsm1Q8VC85 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm1Q8VC85 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm1Q8VC85 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm1Q8VC85 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm1Q8VC85 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.24■□□□□ 0.67
Lsm1Q8VC85 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm1Q8VC85 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.24■□□□□ 0.67
Lsm1Q8VC85 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Lsm1Q8VC85 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm1Q8VC85 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm1Q8VC85 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Lsm1Q8VC85 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.24■□□□□ 0.67
Lsm1Q8VC85 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 42.7 ms