Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps39Q8R5L3 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps39Q8R5L3 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps39Q8R5L3 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps39Q8R5L3 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps39Q8R5L3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps39Q8R5L3 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.12■□□□□ 0.81
Vps39Q8R5L3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.12■□□□□ 0.81
Vps39Q8R5L3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Vps39Q8R5L3 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps39Q8R5L3 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Vps39Q8R5L3 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps39Q8R5L3 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vps39Q8R5L3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Vps39Q8R5L3 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.11■□□□□ 0.81
Vps39Q8R5L3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps39Q8R5L3 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Vps39Q8R5L3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Vps39Q8R5L3 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Vps39Q8R5L3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps39Q8R5L3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps39Q8R5L3 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.1■□□□□ 0.81
Vps39Q8R5L3 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps39Q8R5L3 Gm15820-201ENSMUST00000201566 728 ntBASIC20.1■□□□□ 0.81
Vps39Q8R5L3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps39Q8R5L3 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps39Q8R5L3 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps39Q8R5L3 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Vps39Q8R5L3 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps39Q8R5L3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps39Q8R5L3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps39Q8R5L3 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps39Q8R5L3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Vps39Q8R5L3 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps39Q8R5L3 Notumos-201ENSMUST00000151998 2659 ntBASIC20.09■□□□□ 0.81
Vps39Q8R5L3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Vps39Q8R5L3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps39Q8R5L3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps39Q8R5L3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps39Q8R5L3 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Vps39Q8R5L3 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.08■□□□□ 0.81
Vps39Q8R5L3 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps39Q8R5L3 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps39Q8R5L3 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps39Q8R5L3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.08■□□□□ 0.81
Vps39Q8R5L3 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Vps39Q8R5L3 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
Vps39Q8R5L3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.08■□□□□ 0.8
Vps39Q8R5L3 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps39Q8R5L3 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps39Q8R5L3 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps39Q8R5L3 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.07■□□□□ 0.8
Vps39Q8R5L3 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.07■□□□□ 0.8
Vps39Q8R5L3 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vps39Q8R5L3 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps39Q8R5L3 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Vps39Q8R5L3 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.07■□□□□ 0.8
Vps39Q8R5L3 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Vps39Q8R5L3 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.07■□□□□ 0.8
Vps39Q8R5L3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps39Q8R5L3 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.07■□□□□ 0.8
Vps39Q8R5L3 AC166356.1-201ENSMUST00000228236 1426 ntBASIC20.07■□□□□ 0.8
Vps39Q8R5L3 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps39Q8R5L3 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Vps39Q8R5L3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Vps39Q8R5L3 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps39Q8R5L3 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.06■□□□□ 0.8
Vps39Q8R5L3 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.06■□□□□ 0.8
Vps39Q8R5L3 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.06■□□□□ 0.8
Vps39Q8R5L3 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.06■□□□□ 0.8
Vps39Q8R5L3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vps39Q8R5L3 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps39Q8R5L3 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Vps39Q8R5L3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Vps39Q8R5L3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Vps39Q8R5L3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Vps39Q8R5L3 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps39Q8R5L3 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps39Q8R5L3 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps39Q8R5L3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Vps39Q8R5L3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps39Q8R5L3 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Vps39Q8R5L3 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps39Q8R5L3 Gm34220-201ENSMUST00000223001 2709 ntBASIC20.04■□□□□ 0.8
Vps39Q8R5L3 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps39Q8R5L3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Vps39Q8R5L3 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Vps39Q8R5L3 Gm5812-201ENSMUST00000061073 957 ntBASIC20.04■□□□□ 0.8
Vps39Q8R5L3 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps39Q8R5L3 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps39Q8R5L3 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Vps39Q8R5L3 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Vps39Q8R5L3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Vps39Q8R5L3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps39Q8R5L3 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.03■□□□□ 0.8
Vps39Q8R5L3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps39Q8R5L3 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.03■□□□□ 0.8
Vps39Q8R5L3 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Vps39Q8R5L3 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Vps39Q8R5L3 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms