Protein–RNA interactions for Protein: Q8R3Z5

Cacnb1, Voltage-dependent L-type calcium channel subunit beta-1, mousemouse

Predictions only

Length 597 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb1Q8R3Z5 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cacnb1Q8R3Z5 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC22.36■■□□□ 1.17
Cacnb1Q8R3Z5 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Cacnb1Q8R3Z5 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.36■■□□□ 1.17
Cacnb1Q8R3Z5 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Cacnb1Q8R3Z5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cacnb1Q8R3Z5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cacnb1Q8R3Z5 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cacnb1Q8R3Z5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cacnb1Q8R3Z5 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Cacnb1Q8R3Z5 Gm37965-201ENSMUST00000195304 1362 ntBASIC22.35■■□□□ 1.17
Cacnb1Q8R3Z5 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC22.35■■□□□ 1.17
Cacnb1Q8R3Z5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC22.34■■□□□ 1.17
Cacnb1Q8R3Z5 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cacnb1Q8R3Z5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Cacnb1Q8R3Z5 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC22.34■■□□□ 1.17
Cacnb1Q8R3Z5 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC22.34■■□□□ 1.17
Cacnb1Q8R3Z5 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cacnb1Q8R3Z5 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.34■■□□□ 1.17
Cacnb1Q8R3Z5 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cacnb1Q8R3Z5 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Cacnb1Q8R3Z5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cacnb1Q8R3Z5 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cacnb1Q8R3Z5 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cacnb1Q8R3Z5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cacnb1Q8R3Z5 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Cacnb1Q8R3Z5 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Cacnb1Q8R3Z5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC22.33■■□□□ 1.17
Cacnb1Q8R3Z5 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cacnb1Q8R3Z5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cacnb1Q8R3Z5 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Cacnb1Q8R3Z5 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC22.33■■□□□ 1.17
Cacnb1Q8R3Z5 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.33■■□□□ 1.17
Cacnb1Q8R3Z5 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cacnb1Q8R3Z5 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Cacnb1Q8R3Z5 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
Cacnb1Q8R3Z5 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cacnb1Q8R3Z5 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cacnb1Q8R3Z5 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cacnb1Q8R3Z5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cacnb1Q8R3Z5 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cacnb1Q8R3Z5 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cacnb1Q8R3Z5 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC22.32■■□□□ 1.16
Cacnb1Q8R3Z5 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cacnb1Q8R3Z5 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cacnb1Q8R3Z5 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Cacnb1Q8R3Z5 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cacnb1Q8R3Z5 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Cacnb1Q8R3Z5 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Cacnb1Q8R3Z5 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC22.31■■□□□ 1.16
Cacnb1Q8R3Z5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC22.31■■□□□ 1.16
Cacnb1Q8R3Z5 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cacnb1Q8R3Z5 Golgb1-201ENSMUST00000023534 498 ntBASIC22.31■■□□□ 1.16
Cacnb1Q8R3Z5 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cacnb1Q8R3Z5 Gm43006-201ENSMUST00000197702 1602 ntBASIC22.31■■□□□ 1.16
Cacnb1Q8R3Z5 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cacnb1Q8R3Z5 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cacnb1Q8R3Z5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cacnb1Q8R3Z5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cacnb1Q8R3Z5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cacnb1Q8R3Z5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cacnb1Q8R3Z5 Gm38134-201ENSMUST00000191858 1234 ntTSL 5 BASIC22.3■■□□□ 1.16
Cacnb1Q8R3Z5 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cacnb1Q8R3Z5 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Cacnb1Q8R3Z5 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC22.3■■□□□ 1.16
Cacnb1Q8R3Z5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cacnb1Q8R3Z5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Cacnb1Q8R3Z5 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cacnb1Q8R3Z5 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cacnb1Q8R3Z5 Gm9847-201ENSMUST00000052528 599 ntBASIC22.29■■□□□ 1.16
Cacnb1Q8R3Z5 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cacnb1Q8R3Z5 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cacnb1Q8R3Z5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cacnb1Q8R3Z5 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Cacnb1Q8R3Z5 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cacnb1Q8R3Z5 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cacnb1Q8R3Z5 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
Cacnb1Q8R3Z5 Gm12922-201ENSMUST00000120626 809 ntBASIC22.28■■□□□ 1.16
Cacnb1Q8R3Z5 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cacnb1Q8R3Z5 Gm43530-201ENSMUST00000195920 274 ntBASIC22.28■■□□□ 1.16
Cacnb1Q8R3Z5 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cacnb1Q8R3Z5 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cacnb1Q8R3Z5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cacnb1Q8R3Z5 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cacnb1Q8R3Z5 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cacnb1Q8R3Z5 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
Cacnb1Q8R3Z5 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC22.27■■□□□ 1.16
Cacnb1Q8R3Z5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cacnb1Q8R3Z5 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cacnb1Q8R3Z5 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Cacnb1Q8R3Z5 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cacnb1Q8R3Z5 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.27■■□□□ 1.16
Cacnb1Q8R3Z5 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cacnb1Q8R3Z5 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cacnb1Q8R3Z5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cacnb1Q8R3Z5 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Cacnb1Q8R3Z5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC22.27■■□□□ 1.16
Cacnb1Q8R3Z5 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Cacnb1Q8R3Z5 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cacnb1Q8R3Z5 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 72.1 ms