Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slf1Q8R3P9 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slf1Q8R3P9 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slf1Q8R3P9 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slf1Q8R3P9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slf1Q8R3P9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slf1Q8R3P9 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slf1Q8R3P9 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.24■□□□□ 0.83
Slf1Q8R3P9 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.24■□□□□ 0.83
Slf1Q8R3P9 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Slf1Q8R3P9 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slf1Q8R3P9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slf1Q8R3P9 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC20.23■□□□□ 0.83
Slf1Q8R3P9 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slf1Q8R3P9 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slf1Q8R3P9 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Slf1Q8R3P9 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.23■□□□□ 0.83
Slf1Q8R3P9 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slf1Q8R3P9 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slf1Q8R3P9 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slf1Q8R3P9 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slf1Q8R3P9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Slf1Q8R3P9 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slf1Q8R3P9 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slf1Q8R3P9 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slf1Q8R3P9 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slf1Q8R3P9 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Slf1Q8R3P9 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.22■□□□□ 0.83
Slf1Q8R3P9 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slf1Q8R3P9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slf1Q8R3P9 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slf1Q8R3P9 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC20.22■□□□□ 0.83
Slf1Q8R3P9 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.22■□□□□ 0.83
Slf1Q8R3P9 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slf1Q8R3P9 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slf1Q8R3P9 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slf1Q8R3P9 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Slf1Q8R3P9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slf1Q8R3P9 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slf1Q8R3P9 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slf1Q8R3P9 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slf1Q8R3P9 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slf1Q8R3P9 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slf1Q8R3P9 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.2■□□□□ 0.82
Slf1Q8R3P9 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slf1Q8R3P9 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Slf1Q8R3P9 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slf1Q8R3P9 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Slf1Q8R3P9 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Slf1Q8R3P9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slf1Q8R3P9 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
Slf1Q8R3P9 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slf1Q8R3P9 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slf1Q8R3P9 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slf1Q8R3P9 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.19■□□□□ 0.82
Slf1Q8R3P9 Cap2-205ENSMUST00000225824 1634 ntBASIC20.19■□□□□ 0.82
Slf1Q8R3P9 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slf1Q8R3P9 Gm43182-201ENSMUST00000199476 2528 ntBASIC20.19■□□□□ 0.82
Slf1Q8R3P9 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slf1Q8R3P9 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Slf1Q8R3P9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slf1Q8R3P9 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slf1Q8R3P9 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.18■□□□□ 0.82
Slf1Q8R3P9 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
Slf1Q8R3P9 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slf1Q8R3P9 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slf1Q8R3P9 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slf1Q8R3P9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.18■□□□□ 0.82
Slf1Q8R3P9 Vgf-204ENSMUST00000190827 2834 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slf1Q8R3P9 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Slf1Q8R3P9 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.17■□□□□ 0.82
Slf1Q8R3P9 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slf1Q8R3P9 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slf1Q8R3P9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slf1Q8R3P9 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slf1Q8R3P9 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slf1Q8R3P9 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slf1Q8R3P9 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slf1Q8R3P9 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slf1Q8R3P9 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Slf1Q8R3P9 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slf1Q8R3P9 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.17■□□□□ 0.82
Slf1Q8R3P9 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slf1Q8R3P9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slf1Q8R3P9 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slf1Q8R3P9 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slf1Q8R3P9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slf1Q8R3P9 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slf1Q8R3P9 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slf1Q8R3P9 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.16■□□□□ 0.82
Slf1Q8R3P9 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slf1Q8R3P9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Slf1Q8R3P9 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.16■□□□□ 0.82
Slf1Q8R3P9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Slf1Q8R3P9 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slf1Q8R3P9 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.16■□□□□ 0.82
Slf1Q8R3P9 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slf1Q8R3P9 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slf1Q8R3P9 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Slf1Q8R3P9 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms