Protein–RNA interactions for Protein: Q8R1G6

Pdlim2, PDZ and LIM domain protein 2, mousemouse

Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim2Q8R1G6 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pdlim2Q8R1G6 AC117769.4-201ENSMUST00000225679 685 ntBASIC23.32■■□□□ 1.32
Pdlim2Q8R1G6 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC23.32■■□□□ 1.32
Pdlim2Q8R1G6 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Pdlim2Q8R1G6 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Pdlim2Q8R1G6 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pdlim2Q8R1G6 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pdlim2Q8R1G6 Gm44428-201ENSMUST00000204474 874 ntBASIC23.31■■□□□ 1.32
Pdlim2Q8R1G6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pdlim2Q8R1G6 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pdlim2Q8R1G6 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pdlim2Q8R1G6 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Pdlim2Q8R1G6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Pdlim2Q8R1G6 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pdlim2Q8R1G6 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Pdlim2Q8R1G6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pdlim2Q8R1G6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pdlim2Q8R1G6 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pdlim2Q8R1G6 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Pdlim2Q8R1G6 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pdlim2Q8R1G6 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Pdlim2Q8R1G6 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC23.29■■□□□ 1.32
Pdlim2Q8R1G6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Pdlim2Q8R1G6 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Pdlim2Q8R1G6 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pdlim2Q8R1G6 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
Pdlim2Q8R1G6 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Pdlim2Q8R1G6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC23.29■■□□□ 1.32
Pdlim2Q8R1G6 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Pdlim2Q8R1G6 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Pdlim2Q8R1G6 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Pdlim2Q8R1G6 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pdlim2Q8R1G6 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pdlim2Q8R1G6 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pdlim2Q8R1G6 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pdlim2Q8R1G6 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Pdlim2Q8R1G6 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Pdlim2Q8R1G6 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
Pdlim2Q8R1G6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Pdlim2Q8R1G6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Pdlim2Q8R1G6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Pdlim2Q8R1G6 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Pdlim2Q8R1G6 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Pdlim2Q8R1G6 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Pdlim2Q8R1G6 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pdlim2Q8R1G6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC23.26■■□□□ 1.31
Pdlim2Q8R1G6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Pdlim2Q8R1G6 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Pdlim2Q8R1G6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pdlim2Q8R1G6 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pdlim2Q8R1G6 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Pdlim2Q8R1G6 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC23.25■■□□□ 1.31
Pdlim2Q8R1G6 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC23.25■■□□□ 1.31
Pdlim2Q8R1G6 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Pdlim2Q8R1G6 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.25■■□□□ 1.31
Pdlim2Q8R1G6 Gm45141-201ENSMUST00000206502 1888 ntBASIC23.25■■□□□ 1.31
Pdlim2Q8R1G6 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Pdlim2Q8R1G6 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pdlim2Q8R1G6 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Pdlim2Q8R1G6 Neurl4-202ENSMUST00000108617 4892 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Pdlim2Q8R1G6 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pdlim2Q8R1G6 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Pdlim2Q8R1G6 Gm6802-201ENSMUST00000167843 1983 ntBASIC23.23■■□□□ 1.31
Pdlim2Q8R1G6 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pdlim2Q8R1G6 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pdlim2Q8R1G6 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pdlim2Q8R1G6 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pdlim2Q8R1G6 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pdlim2Q8R1G6 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Pdlim2Q8R1G6 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Pdlim2Q8R1G6 Gm45606-201ENSMUST00000209836 2795 ntBASIC23.23■■□□□ 1.31
Pdlim2Q8R1G6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pdlim2Q8R1G6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pdlim2Q8R1G6 Gm6627-201ENSMUST00000218299 2386 ntBASIC23.22■■□□□ 1.31
Pdlim2Q8R1G6 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Pdlim2Q8R1G6 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pdlim2Q8R1G6 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pdlim2Q8R1G6 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pdlim2Q8R1G6 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pdlim2Q8R1G6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC23.22■■□□□ 1.31
Pdlim2Q8R1G6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pdlim2Q8R1G6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pdlim2Q8R1G6 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pdlim2Q8R1G6 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
Pdlim2Q8R1G6 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Pdlim2Q8R1G6 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC23.21■■□□□ 1.31
Pdlim2Q8R1G6 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pdlim2Q8R1G6 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pdlim2Q8R1G6 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pdlim2Q8R1G6 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Pdlim2Q8R1G6 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC23.2■■□□□ 1.31
Pdlim2Q8R1G6 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pdlim2Q8R1G6 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Pdlim2Q8R1G6 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pdlim2Q8R1G6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC23.2■■□□□ 1.3
Pdlim2Q8R1G6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Pdlim2Q8R1G6 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
Pdlim2Q8R1G6 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC23.2■■□□□ 1.3
Pdlim2Q8R1G6 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC23.2■■□□□ 1.3
Pdlim2Q8R1G6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms