Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Cchcr1Q8K2I2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cchcr1Q8K2I2 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC23.8■■□□□ 1.4
Cchcr1Q8K2I2 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cchcr1Q8K2I2 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
Cchcr1Q8K2I2 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Cchcr1Q8K2I2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC23.79■■□□□ 1.4
Cchcr1Q8K2I2 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.79■■□□□ 1.4
Cchcr1Q8K2I2 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cchcr1Q8K2I2 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Cchcr1Q8K2I2 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC23.79■■□□□ 1.4
Cchcr1Q8K2I2 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cchcr1Q8K2I2 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC23.79■■□□□ 1.4
Cchcr1Q8K2I2 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
Cchcr1Q8K2I2 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC23.78■■□□□ 1.4
Cchcr1Q8K2I2 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cchcr1Q8K2I2 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cchcr1Q8K2I2 Gm42501-201ENSMUST00000200220 1026 ntBASIC23.78■■□□□ 1.4
Cchcr1Q8K2I2 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
Cchcr1Q8K2I2 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Cchcr1Q8K2I2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cchcr1Q8K2I2 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cchcr1Q8K2I2 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cchcr1Q8K2I2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cchcr1Q8K2I2 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cchcr1Q8K2I2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cchcr1Q8K2I2 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC23.77■■□□□ 1.4
Cchcr1Q8K2I2 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC23.77■■□□□ 1.4
Cchcr1Q8K2I2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Cchcr1Q8K2I2 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cchcr1Q8K2I2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cchcr1Q8K2I2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cchcr1Q8K2I2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cchcr1Q8K2I2 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Cchcr1Q8K2I2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cchcr1Q8K2I2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cchcr1Q8K2I2 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
Cchcr1Q8K2I2 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
Cchcr1Q8K2I2 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cchcr1Q8K2I2 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cchcr1Q8K2I2 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC23.76■■□□□ 1.39
Cchcr1Q8K2I2 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
Cchcr1Q8K2I2 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Cchcr1Q8K2I2 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Cchcr1Q8K2I2 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Cchcr1Q8K2I2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC23.75■■□□□ 1.39
Cchcr1Q8K2I2 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cchcr1Q8K2I2 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cchcr1Q8K2I2 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
Cchcr1Q8K2I2 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cchcr1Q8K2I2 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cchcr1Q8K2I2 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cchcr1Q8K2I2 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Cchcr1Q8K2I2 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Cchcr1Q8K2I2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Cchcr1Q8K2I2 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cchcr1Q8K2I2 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cchcr1Q8K2I2 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cchcr1Q8K2I2 Gm5522-201ENSMUST00000189483 1242 ntBASIC23.74■■□□□ 1.39
Cchcr1Q8K2I2 Gm15820-201ENSMUST00000201566 728 ntBASIC23.74■■□□□ 1.39
Cchcr1Q8K2I2 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
Cchcr1Q8K2I2 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Cchcr1Q8K2I2 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
Cchcr1Q8K2I2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
Cchcr1Q8K2I2 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cchcr1Q8K2I2 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cchcr1Q8K2I2 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cchcr1Q8K2I2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cchcr1Q8K2I2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
Cchcr1Q8K2I2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cchcr1Q8K2I2 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cchcr1Q8K2I2 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cchcr1Q8K2I2 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cchcr1Q8K2I2 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cchcr1Q8K2I2 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
Cchcr1Q8K2I2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cchcr1Q8K2I2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC23.72■■□□□ 1.39
Cchcr1Q8K2I2 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Cchcr1Q8K2I2 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Cchcr1Q8K2I2 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Cchcr1Q8K2I2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.71■■□□□ 1.39
Cchcr1Q8K2I2 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cchcr1Q8K2I2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Cchcr1Q8K2I2 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC23.71■■□□□ 1.39
Cchcr1Q8K2I2 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC23.71■■□□□ 1.39
Cchcr1Q8K2I2 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC23.71■■□□□ 1.39
Cchcr1Q8K2I2 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Cchcr1Q8K2I2 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC23.71■■□□□ 1.39
Cchcr1Q8K2I2 Gm5812-201ENSMUST00000061073 957 ntBASIC23.71■■□□□ 1.39
Cchcr1Q8K2I2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC23.71■■□□□ 1.39
Cchcr1Q8K2I2 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cchcr1Q8K2I2 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Cchcr1Q8K2I2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Cchcr1Q8K2I2 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
Cchcr1Q8K2I2 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Cchcr1Q8K2I2 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Cchcr1Q8K2I2 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cchcr1Q8K2I2 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Cchcr1Q8K2I2 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC23.7■■□□□ 1.38
Cchcr1Q8K2I2 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms