Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC23.28■■□□□ 1.32
Rtn1Q8K0T0 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rtn1Q8K0T0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC23.28■■□□□ 1.32
Rtn1Q8K0T0 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Rtn1Q8K0T0 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Rtn1Q8K0T0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC23.27■■□□□ 1.32
Rtn1Q8K0T0 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rtn1Q8K0T0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rtn1Q8K0T0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
Rtn1Q8K0T0 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rtn1Q8K0T0 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Rtn1Q8K0T0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rtn1Q8K0T0 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rtn1Q8K0T0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Rtn1Q8K0T0 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.26■■□□□ 1.31
Rtn1Q8K0T0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rtn1Q8K0T0 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Rtn1Q8K0T0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Rtn1Q8K0T0 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
Rtn1Q8K0T0 Hsf1-207ENSMUST00000228371 2102 ntBASIC23.26■■□□□ 1.31
Rtn1Q8K0T0 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rtn1Q8K0T0 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rtn1Q8K0T0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Rtn1Q8K0T0 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC23.25■■□□□ 1.31
Rtn1Q8K0T0 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
Rtn1Q8K0T0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC23.24■■□□□ 1.31
Rtn1Q8K0T0 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC23.24■■□□□ 1.31
Rtn1Q8K0T0 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Rtn1Q8K0T0 Gm37035-201ENSMUST00000194809 2148 ntBASIC23.24■■□□□ 1.31
Rtn1Q8K0T0 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Rtn1Q8K0T0 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rtn1Q8K0T0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rtn1Q8K0T0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Rtn1Q8K0T0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rtn1Q8K0T0 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rtn1Q8K0T0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Rtn1Q8K0T0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rtn1Q8K0T0 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Rtn1Q8K0T0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
Rtn1Q8K0T0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rtn1Q8K0T0 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
Rtn1Q8K0T0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC23.21■■□□□ 1.31
Rtn1Q8K0T0 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rtn1Q8K0T0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC23.21■■□□□ 1.31
Rtn1Q8K0T0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rtn1Q8K0T0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC23.21■■□□□ 1.31
Rtn1Q8K0T0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rtn1Q8K0T0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rtn1Q8K0T0 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rtn1Q8K0T0 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rtn1Q8K0T0 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Rtn1Q8K0T0 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Rtn1Q8K0T0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rtn1Q8K0T0 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rtn1Q8K0T0 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rtn1Q8K0T0 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rtn1Q8K0T0 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Rtn1Q8K0T0 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rtn1Q8K0T0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Rtn1Q8K0T0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Rtn1Q8K0T0 Mir6236-201ENSMUST00000184437 123 ntBASIC23.19■■□□□ 1.3
Rtn1Q8K0T0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC23.18■■□□□ 1.3
Rtn1Q8K0T0 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rtn1Q8K0T0 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rtn1Q8K0T0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Rtn1Q8K0T0 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
Rtn1Q8K0T0 Gm21956-201ENSMUST00000179946 522 ntBASIC23.18■■□□□ 1.3
Rtn1Q8K0T0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC23.18■■□□□ 1.3
Rtn1Q8K0T0 Gm9207-201ENSMUST00000198773 1115 ntBASIC23.18■■□□□ 1.3
Rtn1Q8K0T0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC23.18■■□□□ 1.3
Rtn1Q8K0T0 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rtn1Q8K0T0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC23.17■■□□□ 1.3
Rtn1Q8K0T0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rtn1Q8K0T0 Gm43759-201ENSMUST00000196925 1261 ntBASIC23.17■■□□□ 1.3
Rtn1Q8K0T0 Gm13241-201ENSMUST00000094493 780 ntBASIC23.17■■□□□ 1.3
Rtn1Q8K0T0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Rtn1Q8K0T0 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC23.17■■□□□ 1.3
Rtn1Q8K0T0 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
Rtn1Q8K0T0 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rtn1Q8K0T0 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
Rtn1Q8K0T0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rtn1Q8K0T0 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rtn1Q8K0T0 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rtn1Q8K0T0 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rtn1Q8K0T0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Rtn1Q8K0T0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rtn1Q8K0T0 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Rtn1Q8K0T0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rtn1Q8K0T0 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rtn1Q8K0T0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC23.15■■□□□ 1.3
Rtn1Q8K0T0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.15■■□□□ 1.3
Rtn1Q8K0T0 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Rtn1Q8K0T0 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rtn1Q8K0T0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Rtn1Q8K0T0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC23.14■■□□□ 1.3
Rtn1Q8K0T0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Rtn1Q8K0T0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Rtn1Q8K0T0 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rtn1Q8K0T0 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Rtn1Q8K0T0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms