Protein–RNA interactions for Protein: Q8K0H1

Slc47a1, Multidrug and toxin extrusion protein 1, mousemouse

Predictions only

Length 567 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc47a1Q8K0H1 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Slc47a1Q8K0H1 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc47a1Q8K0H1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc47a1Q8K0H1 Iqck-206ENSMUST00000208658 2891 ntBASIC19.76■□□□□ 0.75
Slc47a1Q8K0H1 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.76■□□□□ 0.75
Slc47a1Q8K0H1 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc47a1Q8K0H1 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc47a1Q8K0H1 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slc47a1Q8K0H1 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc47a1Q8K0H1 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Slc47a1Q8K0H1 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Slc47a1Q8K0H1 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc47a1Q8K0H1 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc47a1Q8K0H1 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Slc47a1Q8K0H1 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc47a1Q8K0H1 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc47a1Q8K0H1 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Slc47a1Q8K0H1 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc47a1Q8K0H1 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc47a1Q8K0H1 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.75■□□□□ 0.75
Slc47a1Q8K0H1 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Slc47a1Q8K0H1 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.75■□□□□ 0.75
Slc47a1Q8K0H1 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Slc47a1Q8K0H1 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc47a1Q8K0H1 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc47a1Q8K0H1 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc47a1Q8K0H1 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Slc47a1Q8K0H1 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc47a1Q8K0H1 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Slc47a1Q8K0H1 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC19.74■□□□□ 0.75
Slc47a1Q8K0H1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc47a1Q8K0H1 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc47a1Q8K0H1 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Slc47a1Q8K0H1 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Slc47a1Q8K0H1 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Slc47a1Q8K0H1 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc47a1Q8K0H1 Golph3-202ENSMUST00000226517 2359 ntBASIC19.73■□□□□ 0.75
Slc47a1Q8K0H1 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slc47a1Q8K0H1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc47a1Q8K0H1 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Slc47a1Q8K0H1 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc47a1Q8K0H1 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slc47a1Q8K0H1 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.73■□□□□ 0.75
Slc47a1Q8K0H1 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Slc47a1Q8K0H1 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.73■□□□□ 0.75
Slc47a1Q8K0H1 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Slc47a1Q8K0H1 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.73■□□□□ 0.75
Slc47a1Q8K0H1 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Slc47a1Q8K0H1 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.73■□□□□ 0.75
Slc47a1Q8K0H1 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc47a1Q8K0H1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Slc47a1Q8K0H1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.73■□□□□ 0.75
Slc47a1Q8K0H1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc47a1Q8K0H1 Gm40881-201ENSMUST00000223397 166 ntBASIC19.72■□□□□ 0.75
Slc47a1Q8K0H1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc47a1Q8K0H1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc47a1Q8K0H1 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc47a1Q8K0H1 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc47a1Q8K0H1 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Slc47a1Q8K0H1 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc47a1Q8K0H1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Slc47a1Q8K0H1 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc47a1Q8K0H1 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc47a1Q8K0H1 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc47a1Q8K0H1 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc47a1Q8K0H1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc47a1Q8K0H1 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc47a1Q8K0H1 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc47a1Q8K0H1 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc47a1Q8K0H1 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc47a1Q8K0H1 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc47a1Q8K0H1 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.71■□□□□ 0.75
Slc47a1Q8K0H1 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Slc47a1Q8K0H1 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Slc47a1Q8K0H1 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc47a1Q8K0H1 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc47a1Q8K0H1 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Slc47a1Q8K0H1 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Slc47a1Q8K0H1 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Slc47a1Q8K0H1 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.7■□□□□ 0.74
Slc47a1Q8K0H1 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.7■□□□□ 0.74
Slc47a1Q8K0H1 Etf1-202ENSMUST00000180351 108 ntBASIC19.7■□□□□ 0.74
Slc47a1Q8K0H1 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc47a1Q8K0H1 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc47a1Q8K0H1 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.7■□□□□ 0.74
Slc47a1Q8K0H1 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc47a1Q8K0H1 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc47a1Q8K0H1 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Slc47a1Q8K0H1 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.69■□□□□ 0.74
Slc47a1Q8K0H1 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc47a1Q8K0H1 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.69■□□□□ 0.74
Slc47a1Q8K0H1 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc47a1Q8K0H1 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slc47a1Q8K0H1 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.69■□□□□ 0.74
Slc47a1Q8K0H1 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Slc47a1Q8K0H1 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc47a1Q8K0H1 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Slc47a1Q8K0H1 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Slc47a1Q8K0H1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Slc47a1Q8K0H1 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms