Protein–RNA interactions for Protein: Q8JZK9

Hmgcs1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgcs1Q8JZK9 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Hmgcs1Q8JZK9 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Hmgcs1Q8JZK9 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgcs1Q8JZK9 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Hmgcs1Q8JZK9 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Hmgcs1Q8JZK9 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgcs1Q8JZK9 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.2■□□□□ 0.66
Hmgcs1Q8JZK9 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgcs1Q8JZK9 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgcs1Q8JZK9 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgcs1Q8JZK9 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgcs1Q8JZK9 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hmgcs1Q8JZK9 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgcs1Q8JZK9 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgcs1Q8JZK9 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgcs1Q8JZK9 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgcs1Q8JZK9 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Hmgcs1Q8JZK9 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC19.19■□□□□ 0.66
Hmgcs1Q8JZK9 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgcs1Q8JZK9 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgcs1Q8JZK9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hmgcs1Q8JZK9 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcs1Q8JZK9 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcs1Q8JZK9 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcs1Q8JZK9 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Hmgcs1Q8JZK9 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcs1Q8JZK9 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcs1Q8JZK9 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Hmgcs1Q8JZK9 Gm40881-201ENSMUST00000223397 166 ntBASIC19.18■□□□□ 0.66
Hmgcs1Q8JZK9 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcs1Q8JZK9 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcs1Q8JZK9 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Hmgcs1Q8JZK9 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcs1Q8JZK9 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Hmgcs1Q8JZK9 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hmgcs1Q8JZK9 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgcs1Q8JZK9 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgcs1Q8JZK9 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgcs1Q8JZK9 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgcs1Q8JZK9 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgcs1Q8JZK9 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgcs1Q8JZK9 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Hmgcs1Q8JZK9 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgcs1Q8JZK9 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgcs1Q8JZK9 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgcs1Q8JZK9 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgcs1Q8JZK9 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgcs1Q8JZK9 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hmgcs1Q8JZK9 Golph3-202ENSMUST00000226517 2359 ntBASIC19.17■□□□□ 0.66
Hmgcs1Q8JZK9 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgcs1Q8JZK9 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgcs1Q8JZK9 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.16■□□□□ 0.66
Hmgcs1Q8JZK9 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgcs1Q8JZK9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.16■□□□□ 0.66
Hmgcs1Q8JZK9 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgcs1Q8JZK9 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.16■□□□□ 0.66
Hmgcs1Q8JZK9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgcs1Q8JZK9 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgcs1Q8JZK9 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgcs1Q8JZK9 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.16■□□□□ 0.66
Hmgcs1Q8JZK9 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgcs1Q8JZK9 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hmgcs1Q8JZK9 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgcs1Q8JZK9 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgcs1Q8JZK9 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgcs1Q8JZK9 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgcs1Q8JZK9 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgcs1Q8JZK9 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC19.15■□□□□ 0.66
Hmgcs1Q8JZK9 Gm5812-201ENSMUST00000061073 957 ntBASIC19.15■□□□□ 0.66
Hmgcs1Q8JZK9 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgcs1Q8JZK9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgcs1Q8JZK9 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgcs1Q8JZK9 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgcs1Q8JZK9 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgcs1Q8JZK9 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Hmgcs1Q8JZK9 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hmgcs1Q8JZK9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hmgcs1Q8JZK9 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Hmgcs1Q8JZK9 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hmgcs1Q8JZK9 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgcs1Q8JZK9 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgcs1Q8JZK9 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgcs1Q8JZK9 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgcs1Q8JZK9 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgcs1Q8JZK9 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgcs1Q8JZK9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hmgcs1Q8JZK9 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgcs1Q8JZK9 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgcs1Q8JZK9 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Hmgcs1Q8JZK9 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
Hmgcs1Q8JZK9 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgcs1Q8JZK9 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.13■□□□□ 0.65
Hmgcs1Q8JZK9 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC19.13■□□□□ 0.65
Hmgcs1Q8JZK9 Gm15820-201ENSMUST00000201566 728 ntBASIC19.13■□□□□ 0.65
Hmgcs1Q8JZK9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgcs1Q8JZK9 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Hmgcs1Q8JZK9 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgcs1Q8JZK9 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Hmgcs1Q8JZK9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hmgcs1Q8JZK9 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms