Protein–RNA interactions for Protein: Q8CJI4

H1fnt, Testis-specific H1 histone, mousemouse

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fntQ8CJI4 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
H1fntQ8CJI4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
H1fntQ8CJI4 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
H1fntQ8CJI4 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
H1fntQ8CJI4 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC18.35■□□□□ 0.53
H1fntQ8CJI4 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
H1fntQ8CJI4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
H1fntQ8CJI4 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
H1fntQ8CJI4 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
H1fntQ8CJI4 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
H1fntQ8CJI4 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H1fntQ8CJI4 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.34■□□□□ 0.53
H1fntQ8CJI4 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H1fntQ8CJI4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
H1fntQ8CJI4 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H1fntQ8CJI4 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
H1fntQ8CJI4 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H1fntQ8CJI4 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H1fntQ8CJI4 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.34■□□□□ 0.53
H1fntQ8CJI4 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
H1fntQ8CJI4 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC18.34■□□□□ 0.53
H1fntQ8CJI4 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H1fntQ8CJI4 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
H1fntQ8CJI4 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
H1fntQ8CJI4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
H1fntQ8CJI4 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
H1fntQ8CJI4 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
H1fntQ8CJI4 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
H1fntQ8CJI4 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
H1fntQ8CJI4 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
H1fntQ8CJI4 Gm40881-201ENSMUST00000223397 166 ntBASIC18.33■□□□□ 0.52
H1fntQ8CJI4 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
H1fntQ8CJI4 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.32■□□□□ 0.52
H1fntQ8CJI4 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H1fntQ8CJI4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H1fntQ8CJI4 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
H1fntQ8CJI4 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC18.32■□□□□ 0.52
H1fntQ8CJI4 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC18.32■□□□□ 0.52
H1fntQ8CJI4 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
H1fntQ8CJI4 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H1fntQ8CJI4 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H1fntQ8CJI4 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
H1fntQ8CJI4 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
H1fntQ8CJI4 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H1fntQ8CJI4 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
H1fntQ8CJI4 Gm7143-201ENSMUST00000222811 859 ntBASIC18.31■□□□□ 0.52
H1fntQ8CJI4 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
H1fntQ8CJI4 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H1fntQ8CJI4 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
H1fntQ8CJI4 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H1fntQ8CJI4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H1fntQ8CJI4 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
H1fntQ8CJI4 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.3■□□□□ 0.52
H1fntQ8CJI4 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
H1fntQ8CJI4 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC18.3■□□□□ 0.52
H1fntQ8CJI4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
H1fntQ8CJI4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
H1fntQ8CJI4 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H1fntQ8CJI4 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H1fntQ8CJI4 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H1fntQ8CJI4 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
H1fntQ8CJI4 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
H1fntQ8CJI4 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
H1fntQ8CJI4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H1fntQ8CJI4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H1fntQ8CJI4 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
H1fntQ8CJI4 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
H1fntQ8CJI4 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
H1fntQ8CJI4 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
H1fntQ8CJI4 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
H1fntQ8CJI4 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.29■□□□□ 0.52
H1fntQ8CJI4 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
H1fntQ8CJI4 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H1fntQ8CJI4 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H1fntQ8CJI4 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H1fntQ8CJI4 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
H1fntQ8CJI4 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
H1fntQ8CJI4 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H1fntQ8CJI4 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H1fntQ8CJI4 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H1fntQ8CJI4 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
H1fntQ8CJI4 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
H1fntQ8CJI4 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H1fntQ8CJI4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H1fntQ8CJI4 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H1fntQ8CJI4 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H1fntQ8CJI4 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
H1fntQ8CJI4 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
H1fntQ8CJI4 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
H1fntQ8CJI4 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
H1fntQ8CJI4 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
H1fntQ8CJI4 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
H1fntQ8CJI4 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
H1fntQ8CJI4 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H1fntQ8CJI4 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
H1fntQ8CJI4 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
H1fntQ8CJI4 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.27■□□□□ 0.52
H1fntQ8CJI4 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.27■□□□□ 0.52
H1fntQ8CJI4 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
H1fntQ8CJI4 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms