Protein–RNA interactions for Protein: Q8CIR4

Trpm6, Transient receptor potential cation channel subfamily M member 6, mousemouse

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm6Q8CIR4 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Trpm6Q8CIR4 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Trpm6Q8CIR4 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trpm6Q8CIR4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Trpm6Q8CIR4 Gm11421-201ENSMUST00000122124 294 ntBASIC20.35■□□□□ 0.85
Trpm6Q8CIR4 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trpm6Q8CIR4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC20.35■□□□□ 0.85
Trpm6Q8CIR4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Trpm6Q8CIR4 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
Trpm6Q8CIR4 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trpm6Q8CIR4 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trpm6Q8CIR4 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trpm6Q8CIR4 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Trpm6Q8CIR4 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trpm6Q8CIR4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trpm6Q8CIR4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trpm6Q8CIR4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Trpm6Q8CIR4 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Trpm6Q8CIR4 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Trpm6Q8CIR4 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trpm6Q8CIR4 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trpm6Q8CIR4 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trpm6Q8CIR4 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Trpm6Q8CIR4 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC20.33■□□□□ 0.85
Trpm6Q8CIR4 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Trpm6Q8CIR4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trpm6Q8CIR4 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Trpm6Q8CIR4 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trpm6Q8CIR4 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Trpm6Q8CIR4 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Trpm6Q8CIR4 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trpm6Q8CIR4 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trpm6Q8CIR4 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trpm6Q8CIR4 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC20.31■□□□□ 0.84
Trpm6Q8CIR4 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trpm6Q8CIR4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.31■□□□□ 0.84
Trpm6Q8CIR4 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trpm6Q8CIR4 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trpm6Q8CIR4 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Trpm6Q8CIR4 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trpm6Q8CIR4 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
Trpm6Q8CIR4 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trpm6Q8CIR4 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Trpm6Q8CIR4 Gm42569-201ENSMUST00000200539 472 ntBASIC20.31■□□□□ 0.84
Trpm6Q8CIR4 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trpm6Q8CIR4 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Trpm6Q8CIR4 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Trpm6Q8CIR4 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC20.3■□□□□ 0.84
Trpm6Q8CIR4 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Trpm6Q8CIR4 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm6Q8CIR4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm6Q8CIR4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm6Q8CIR4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm6Q8CIR4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC20.29■□□□□ 0.84
Trpm6Q8CIR4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm6Q8CIR4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm6Q8CIR4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Trpm6Q8CIR4 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
Trpm6Q8CIR4 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm6Q8CIR4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm6Q8CIR4 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm6Q8CIR4 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Trpm6Q8CIR4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm6Q8CIR4 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm6Q8CIR4 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm6Q8CIR4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Trpm6Q8CIR4 Gm37179-201ENSMUST00000194862 823 ntBASIC20.27■□□□□ 0.84
Trpm6Q8CIR4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm6Q8CIR4 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm6Q8CIR4 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm6Q8CIR4 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm6Q8CIR4 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm6Q8CIR4 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Trpm6Q8CIR4 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trpm6Q8CIR4 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Trpm6Q8CIR4 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trpm6Q8CIR4 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Trpm6Q8CIR4 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.26■□□□□ 0.83
Trpm6Q8CIR4 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC20.26■□□□□ 0.83
Trpm6Q8CIR4 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Trpm6Q8CIR4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.26■□□□□ 0.83
Trpm6Q8CIR4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm6Q8CIR4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.25■□□□□ 0.83
Trpm6Q8CIR4 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm6Q8CIR4 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC20.25■□□□□ 0.83
Trpm6Q8CIR4 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm6Q8CIR4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm6Q8CIR4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.25■□□□□ 0.83
Trpm6Q8CIR4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm6Q8CIR4 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Trpm6Q8CIR4 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm6Q8CIR4 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm6Q8CIR4 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.24■□□□□ 0.83
Trpm6Q8CIR4 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Trpm6Q8CIR4 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm6Q8CIR4 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm6Q8CIR4 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm6Q8CIR4 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Trpm6Q8CIR4 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC20.24■□□□□ 0.83
Trpm6Q8CIR4 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.24■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms