Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rdh1Q8CGV4 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rdh1Q8CGV4 Mir6236-201ENSMUST00000184437 123 ntBASIC19.62■□□□□ 0.73
Rdh1Q8CGV4 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Rdh1Q8CGV4 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
Rdh1Q8CGV4 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rdh1Q8CGV4 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rdh1Q8CGV4 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rdh1Q8CGV4 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rdh1Q8CGV4 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rdh1Q8CGV4 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.61■□□□□ 0.73
Rdh1Q8CGV4 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rdh1Q8CGV4 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
Rdh1Q8CGV4 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rdh1Q8CGV4 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.61■□□□□ 0.73
Rdh1Q8CGV4 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rdh1Q8CGV4 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rdh1Q8CGV4 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rdh1Q8CGV4 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.61■□□□□ 0.73
Rdh1Q8CGV4 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rdh1Q8CGV4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rdh1Q8CGV4 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
Rdh1Q8CGV4 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rdh1Q8CGV4 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rdh1Q8CGV4 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rdh1Q8CGV4 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rdh1Q8CGV4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
Rdh1Q8CGV4 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rdh1Q8CGV4 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rdh1Q8CGV4 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rdh1Q8CGV4 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rdh1Q8CGV4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rdh1Q8CGV4 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rdh1Q8CGV4 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rdh1Q8CGV4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC19.59■□□□□ 0.73
Rdh1Q8CGV4 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Rdh1Q8CGV4 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rdh1Q8CGV4 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC19.59■□□□□ 0.73
Rdh1Q8CGV4 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.59■□□□□ 0.73
Rdh1Q8CGV4 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.59■□□□□ 0.73
Rdh1Q8CGV4 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rdh1Q8CGV4 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rdh1Q8CGV4 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rdh1Q8CGV4 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rdh1Q8CGV4 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rdh1Q8CGV4 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
Rdh1Q8CGV4 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rdh1Q8CGV4 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Rdh1Q8CGV4 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rdh1Q8CGV4 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rdh1Q8CGV4 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rdh1Q8CGV4 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rdh1Q8CGV4 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rdh1Q8CGV4 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rdh1Q8CGV4 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC19.57■□□□□ 0.72
Rdh1Q8CGV4 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rdh1Q8CGV4 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rdh1Q8CGV4 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rdh1Q8CGV4 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rdh1Q8CGV4 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.57■□□□□ 0.72
Rdh1Q8CGV4 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rdh1Q8CGV4 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Rdh1Q8CGV4 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rdh1Q8CGV4 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC19.56■□□□□ 0.72
Rdh1Q8CGV4 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rdh1Q8CGV4 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rdh1Q8CGV4 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.56■□□□□ 0.72
Rdh1Q8CGV4 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC19.56■□□□□ 0.72
Rdh1Q8CGV4 Gm26833-201ENSMUST00000180899 440 ntBASIC19.56■□□□□ 0.72
Rdh1Q8CGV4 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
Rdh1Q8CGV4 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rdh1Q8CGV4 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.56■□□□□ 0.72
Rdh1Q8CGV4 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rdh1Q8CGV4 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rdh1Q8CGV4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rdh1Q8CGV4 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rdh1Q8CGV4 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC19.56■□□□□ 0.72
Rdh1Q8CGV4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rdh1Q8CGV4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rdh1Q8CGV4 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC19.55■□□□□ 0.72
Rdh1Q8CGV4 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rdh1Q8CGV4 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rdh1Q8CGV4 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Rdh1Q8CGV4 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Rdh1Q8CGV4 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Rdh1Q8CGV4 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rdh1Q8CGV4 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rdh1Q8CGV4 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rdh1Q8CGV4 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rdh1Q8CGV4 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rdh1Q8CGV4 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Rdh1Q8CGV4 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rdh1Q8CGV4 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rdh1Q8CGV4 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.54■□□□□ 0.72
Rdh1Q8CGV4 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rdh1Q8CGV4 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rdh1Q8CGV4 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Rdh1Q8CGV4 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rdh1Q8CGV4 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Rdh1Q8CGV4 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms