Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist3h2bbQ8CGP0 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hist3h2bbQ8CGP0 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hist3h2bbQ8CGP0 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC15.38■□□□□ 0.05
Hist3h2bbQ8CGP0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC15.38■□□□□ 0.05
Hist3h2bbQ8CGP0 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC15.38■□□□□ 0.05
Hist3h2bbQ8CGP0 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist3h2bbQ8CGP0 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Hist3h2bbQ8CGP0 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Hist3h2bbQ8CGP0 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hist3h2bbQ8CGP0 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Hist3h2bbQ8CGP0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist3h2bbQ8CGP0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Hist3h2bbQ8CGP0 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hist3h2bbQ8CGP0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC15.37■□□□□ 0.05
Hist3h2bbQ8CGP0 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hist3h2bbQ8CGP0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hist3h2bbQ8CGP0 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Hist3h2bbQ8CGP0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hist3h2bbQ8CGP0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Hist3h2bbQ8CGP0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC15.37■□□□□ 0.05
Hist3h2bbQ8CGP0 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hist3h2bbQ8CGP0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hist3h2bbQ8CGP0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hist3h2bbQ8CGP0 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hist3h2bbQ8CGP0 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Hist3h2bbQ8CGP0 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hist3h2bbQ8CGP0 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hist3h2bbQ8CGP0 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
Hist3h2bbQ8CGP0 AC117245.4-201ENSMUST00000217388 1646 ntBASIC15.36■□□□□ 0.05
Hist3h2bbQ8CGP0 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hist3h2bbQ8CGP0 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Hist3h2bbQ8CGP0 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Hist3h2bbQ8CGP0 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hist3h2bbQ8CGP0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hist3h2bbQ8CGP0 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Hist3h2bbQ8CGP0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hist3h2bbQ8CGP0 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Hist3h2bbQ8CGP0 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Hist3h2bbQ8CGP0 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Hist3h2bbQ8CGP0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC15.35■□□□□ 0.05
Hist3h2bbQ8CGP0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC15.35■□□□□ 0.05
Hist3h2bbQ8CGP0 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hist3h2bbQ8CGP0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hist3h2bbQ8CGP0 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hist3h2bbQ8CGP0 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Hist3h2bbQ8CGP0 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hist3h2bbQ8CGP0 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Hist3h2bbQ8CGP0 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Hist3h2bbQ8CGP0 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Hist3h2bbQ8CGP0 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hist3h2bbQ8CGP0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist3h2bbQ8CGP0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist3h2bbQ8CGP0 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist3h2bbQ8CGP0 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hist3h2bbQ8CGP0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hist3h2bbQ8CGP0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Hist3h2bbQ8CGP0 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC15.34■□□□□ 0.05
Hist3h2bbQ8CGP0 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist3h2bbQ8CGP0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist3h2bbQ8CGP0 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist3h2bbQ8CGP0 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist3h2bbQ8CGP0 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Hist3h2bbQ8CGP0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hist3h2bbQ8CGP0 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Hist3h2bbQ8CGP0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Hist3h2bbQ8CGP0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hist3h2bbQ8CGP0 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hist3h2bbQ8CGP0 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hist3h2bbQ8CGP0 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Hist3h2bbQ8CGP0 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.33■□□□□ 0.04
Hist3h2bbQ8CGP0 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Hist3h2bbQ8CGP0 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC15.32■□□□□ 0.04
Hist3h2bbQ8CGP0 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hist3h2bbQ8CGP0 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Hist3h2bbQ8CGP0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hist3h2bbQ8CGP0 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hist3h2bbQ8CGP0 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Hist3h2bbQ8CGP0 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Hist3h2bbQ8CGP0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hist3h2bbQ8CGP0 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC15.31■□□□□ 0.04
Hist3h2bbQ8CGP0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hist3h2bbQ8CGP0 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hist3h2bbQ8CGP0 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hist3h2bbQ8CGP0 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hist3h2bbQ8CGP0 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hist3h2bbQ8CGP0 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Hist3h2bbQ8CGP0 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Hist3h2bbQ8CGP0 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Hist3h2bbQ8CGP0 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hist3h2bbQ8CGP0 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Hist3h2bbQ8CGP0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Hist3h2bbQ8CGP0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hist3h2bbQ8CGP0 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hist3h2bbQ8CGP0 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Hist3h2bbQ8CGP0 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hist3h2bbQ8CGP0 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
Hist3h2bbQ8CGP0 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC15.3■□□□□ 0.04
Hist3h2bbQ8CGP0 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Hist3h2bbQ8CGP0 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms