Protein–RNA interactions for Protein: Q8CEG5

Ccdc28b, Coiled-coil domain-containing protein 28B, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28bQ8CEG5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc28bQ8CEG5 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc28bQ8CEG5 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Ccdc28bQ8CEG5 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc28bQ8CEG5 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.84■□□□□ 0.77
Ccdc28bQ8CEG5 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc28bQ8CEG5 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Ccdc28bQ8CEG5 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC19.83■□□□□ 0.77
Ccdc28bQ8CEG5 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.83■□□□□ 0.77
Ccdc28bQ8CEG5 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Ccdc28bQ8CEG5 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC19.83■□□□□ 0.76
Ccdc28bQ8CEG5 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc28bQ8CEG5 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.82■□□□□ 0.76
Ccdc28bQ8CEG5 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc28bQ8CEG5 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc28bQ8CEG5 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
Ccdc28bQ8CEG5 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc28bQ8CEG5 Adamtsl5-201ENSMUST00000095446 1957 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Ccdc28bQ8CEG5 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.82■□□□□ 0.76
Ccdc28bQ8CEG5 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Ccdc28bQ8CEG5 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc28bQ8CEG5 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc28bQ8CEG5 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc28bQ8CEG5 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc28bQ8CEG5 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc28bQ8CEG5 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc28bQ8CEG5 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc28bQ8CEG5 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc28bQ8CEG5 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Ccdc28bQ8CEG5 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc28bQ8CEG5 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc28bQ8CEG5 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc28bQ8CEG5 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc28bQ8CEG5 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc28bQ8CEG5 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc28bQ8CEG5 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.8■□□□□ 0.76
Ccdc28bQ8CEG5 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.8■□□□□ 0.76
Ccdc28bQ8CEG5 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.8■□□□□ 0.76
Ccdc28bQ8CEG5 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Ccdc28bQ8CEG5 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
Ccdc28bQ8CEG5 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc28bQ8CEG5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc28bQ8CEG5 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc28bQ8CEG5 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Ccdc28bQ8CEG5 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
Ccdc28bQ8CEG5 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC19.79■□□□□ 0.76
Ccdc28bQ8CEG5 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
Ccdc28bQ8CEG5 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc28bQ8CEG5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Ccdc28bQ8CEG5 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc28bQ8CEG5 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc28bQ8CEG5 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc28bQ8CEG5 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC19.78■□□□□ 0.76
Ccdc28bQ8CEG5 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Ccdc28bQ8CEG5 Gm7332-201ENSMUST00000118351 454 ntBASIC19.78■□□□□ 0.76
Ccdc28bQ8CEG5 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc28bQ8CEG5 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc28bQ8CEG5 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ccdc28bQ8CEG5 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Ccdc28bQ8CEG5 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Ccdc28bQ8CEG5 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Ccdc28bQ8CEG5 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC19.77■□□□□ 0.75
Ccdc28bQ8CEG5 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc28bQ8CEG5 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc28bQ8CEG5 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc28bQ8CEG5 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc28bQ8CEG5 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.76■□□□□ 0.75
Ccdc28bQ8CEG5 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc28bQ8CEG5 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC19.76■□□□□ 0.75
Ccdc28bQ8CEG5 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc28bQ8CEG5 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Ccdc28bQ8CEG5 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Ccdc28bQ8CEG5 Gm28536-201ENSMUST00000190971 1317 ntBASIC19.76■□□□□ 0.75
Ccdc28bQ8CEG5 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc28bQ8CEG5 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc28bQ8CEG5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Ccdc28bQ8CEG5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc28bQ8CEG5 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc28bQ8CEG5 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc28bQ8CEG5 Jtb-201ENSMUST00000029546 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc28bQ8CEG5 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc28bQ8CEG5 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Ccdc28bQ8CEG5 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc28bQ8CEG5 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc28bQ8CEG5 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc28bQ8CEG5 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc28bQ8CEG5 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.74■□□□□ 0.75
Ccdc28bQ8CEG5 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc28bQ8CEG5 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Ccdc28bQ8CEG5 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc28bQ8CEG5 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc28bQ8CEG5 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
Ccdc28bQ8CEG5 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC19.74■□□□□ 0.75
Ccdc28bQ8CEG5 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc28bQ8CEG5 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ccdc28bQ8CEG5 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
Ccdc28bQ8CEG5 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc28bQ8CEG5 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc28bQ8CEG5 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ccdc28bQ8CEG5 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms