Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SynpoQ8CC35 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SynpoQ8CC35 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SynpoQ8CC35 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SynpoQ8CC35 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SynpoQ8CC35 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SynpoQ8CC35 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SynpoQ8CC35 Gm27454-201ENSMUST00000185090 204 ntBASIC19.32■□□□□ 0.68
SynpoQ8CC35 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SynpoQ8CC35 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SynpoQ8CC35 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.32■□□□□ 0.68
SynpoQ8CC35 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SynpoQ8CC35 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
SynpoQ8CC35 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.32■□□□□ 0.68
SynpoQ8CC35 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
SynpoQ8CC35 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.31■□□□□ 0.68
SynpoQ8CC35 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SynpoQ8CC35 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SynpoQ8CC35 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SynpoQ8CC35 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SynpoQ8CC35 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SynpoQ8CC35 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SynpoQ8CC35 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SynpoQ8CC35 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SynpoQ8CC35 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SynpoQ8CC35 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SynpoQ8CC35 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SynpoQ8CC35 Gm9870-201ENSMUST00000063874 645 ntBASIC19.3■□□□□ 0.68
SynpoQ8CC35 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SynpoQ8CC35 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SynpoQ8CC35 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SynpoQ8CC35 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SynpoQ8CC35 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
SynpoQ8CC35 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SynpoQ8CC35 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
SynpoQ8CC35 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SynpoQ8CC35 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SynpoQ8CC35 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SynpoQ8CC35 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SynpoQ8CC35 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SynpoQ8CC35 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SynpoQ8CC35 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
SynpoQ8CC35 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SynpoQ8CC35 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SynpoQ8CC35 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.28■□□□□ 0.68
SynpoQ8CC35 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SynpoQ8CC35 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SynpoQ8CC35 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SynpoQ8CC35 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.28■□□□□ 0.68
SynpoQ8CC35 Gm45417-201ENSMUST00000209533 758 ntBASIC19.28■□□□□ 0.68
SynpoQ8CC35 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SynpoQ8CC35 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SynpoQ8CC35 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SynpoQ8CC35 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
SynpoQ8CC35 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SynpoQ8CC35 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SynpoQ8CC35 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC19.27■□□□□ 0.68
SynpoQ8CC35 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
SynpoQ8CC35 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SynpoQ8CC35 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.67
SynpoQ8CC35 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SynpoQ8CC35 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SynpoQ8CC35 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SynpoQ8CC35 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.26■□□□□ 0.67
SynpoQ8CC35 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC19.26■□□□□ 0.67
SynpoQ8CC35 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.26■□□□□ 0.67
SynpoQ8CC35 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SynpoQ8CC35 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SynpoQ8CC35 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SynpoQ8CC35 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
SynpoQ8CC35 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SynpoQ8CC35 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SynpoQ8CC35 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SynpoQ8CC35 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SynpoQ8CC35 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SynpoQ8CC35 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC19.25■□□□□ 0.67
SynpoQ8CC35 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SynpoQ8CC35 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SynpoQ8CC35 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SynpoQ8CC35 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.25■□□□□ 0.67
SynpoQ8CC35 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SynpoQ8CC35 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SynpoQ8CC35 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SynpoQ8CC35 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SynpoQ8CC35 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SynpoQ8CC35 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SynpoQ8CC35 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SynpoQ8CC35 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SynpoQ8CC35 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SynpoQ8CC35 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SynpoQ8CC35 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SynpoQ8CC35 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SynpoQ8CC35 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SynpoQ8CC35 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
SynpoQ8CC35 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SynpoQ8CC35 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
SynpoQ8CC35 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SynpoQ8CC35 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SynpoQ8CC35 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SynpoQ8CC35 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms