Protein–RNA interactions for Protein: Q8CA03

Slc46a2, Thymic stromal cotransporter protein, mousemouse

Predictions only

Length 479 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a2Q8CA03 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Slc46a2Q8CA03 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Slc46a2Q8CA03 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Slc46a2Q8CA03 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Slc46a2Q8CA03 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.33■□□□□ 0.68
Slc46a2Q8CA03 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Slc46a2Q8CA03 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc46a2Q8CA03 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc46a2Q8CA03 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc46a2Q8CA03 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Slc46a2Q8CA03 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC19.33■□□□□ 0.68
Slc46a2Q8CA03 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.32■□□□□ 0.68
Slc46a2Q8CA03 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc46a2Q8CA03 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Slc46a2Q8CA03 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc46a2Q8CA03 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Slc46a2Q8CA03 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc46a2Q8CA03 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc46a2Q8CA03 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC19.32■□□□□ 0.68
Slc46a2Q8CA03 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc46a2Q8CA03 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc46a2Q8CA03 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Slc46a2Q8CA03 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc46a2Q8CA03 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc46a2Q8CA03 Gm5112-201ENSMUST00000204407 2368 ntBASIC19.31■□□□□ 0.68
Slc46a2Q8CA03 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slc46a2Q8CA03 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc46a2Q8CA03 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc46a2Q8CA03 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Slc46a2Q8CA03 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Slc46a2Q8CA03 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Slc46a2Q8CA03 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc46a2Q8CA03 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc46a2Q8CA03 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.3■□□□□ 0.68
Slc46a2Q8CA03 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC19.3■□□□□ 0.68
Slc46a2Q8CA03 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc46a2Q8CA03 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Slc46a2Q8CA03 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Slc46a2Q8CA03 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC19.29■□□□□ 0.68
Slc46a2Q8CA03 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc46a2Q8CA03 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slc46a2Q8CA03 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Slc46a2Q8CA03 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc46a2Q8CA03 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Slc46a2Q8CA03 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc46a2Q8CA03 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.28■□□□□ 0.68
Slc46a2Q8CA03 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc46a2Q8CA03 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Slc46a2Q8CA03 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc46a2Q8CA03 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc46a2Q8CA03 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc46a2Q8CA03 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Slc46a2Q8CA03 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Slc46a2Q8CA03 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC19.28■□□□□ 0.68
Slc46a2Q8CA03 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc46a2Q8CA03 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc46a2Q8CA03 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc46a2Q8CA03 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc46a2Q8CA03 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Slc46a2Q8CA03 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Slc46a2Q8CA03 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Slc46a2Q8CA03 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc46a2Q8CA03 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Slc46a2Q8CA03 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc46a2Q8CA03 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc46a2Q8CA03 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc46a2Q8CA03 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.27■□□□□ 0.68
Slc46a2Q8CA03 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Slc46a2Q8CA03 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc46a2Q8CA03 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Slc46a2Q8CA03 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Slc46a2Q8CA03 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Slc46a2Q8CA03 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Slc46a2Q8CA03 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.27■□□□□ 0.67
Slc46a2Q8CA03 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Slc46a2Q8CA03 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc46a2Q8CA03 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc46a2Q8CA03 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Slc46a2Q8CA03 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.26■□□□□ 0.67
Slc46a2Q8CA03 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc46a2Q8CA03 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Slc46a2Q8CA03 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Slc46a2Q8CA03 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc46a2Q8CA03 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Slc46a2Q8CA03 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Slc46a2Q8CA03 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.26■□□□□ 0.67
Slc46a2Q8CA03 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc46a2Q8CA03 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Slc46a2Q8CA03 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc46a2Q8CA03 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.25■□□□□ 0.67
Slc46a2Q8CA03 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slc46a2Q8CA03 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Slc46a2Q8CA03 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc46a2Q8CA03 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc46a2Q8CA03 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
Slc46a2Q8CA03 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Slc46a2Q8CA03 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Slc46a2Q8CA03 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Slc46a2Q8CA03 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC19.25■□□□□ 0.67
Slc46a2Q8CA03 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms