Protein–RNA interactions for Protein: Q8C878

Uba3, NEDD8-activating enzyme E1 catalytic subunit, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Uba3Q8C878 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Uba3Q8C878 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Uba3Q8C878 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC21.21■□□□□ 0.99
Uba3Q8C878 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Uba3Q8C878 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Uba3Q8C878 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Uba3Q8C878 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Uba3Q8C878 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Uba3Q8C878 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC21.21■□□□□ 0.99
Uba3Q8C878 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Uba3Q8C878 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
Uba3Q8C878 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Uba3Q8C878 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.99
Uba3Q8C878 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
Uba3Q8C878 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC21.2■□□□□ 0.98
Uba3Q8C878 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC21.2■□□□□ 0.98
Uba3Q8C878 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Uba3Q8C878 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Uba3Q8C878 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Uba3Q8C878 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Uba3Q8C878 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Uba3Q8C878 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
Uba3Q8C878 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Uba3Q8C878 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Uba3Q8C878 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.19■□□□□ 0.98
Uba3Q8C878 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC21.19■□□□□ 0.98
Uba3Q8C878 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Uba3Q8C878 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC21.19■□□□□ 0.98
Uba3Q8C878 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Uba3Q8C878 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC21.19■□□□□ 0.98
Uba3Q8C878 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Uba3Q8C878 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.18■□□□□ 0.98
Uba3Q8C878 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Uba3Q8C878 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Uba3Q8C878 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Uba3Q8C878 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Uba3Q8C878 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Uba3Q8C878 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Uba3Q8C878 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uba3Q8C878 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uba3Q8C878 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uba3Q8C878 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uba3Q8C878 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Uba3Q8C878 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Uba3Q8C878 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Uba3Q8C878 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Uba3Q8C878 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Uba3Q8C878 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.16■□□□□ 0.98
Uba3Q8C878 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Uba3Q8C878 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Uba3Q8C878 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Uba3Q8C878 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Uba3Q8C878 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
Uba3Q8C878 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uba3Q8C878 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.15■□□□□ 0.98
Uba3Q8C878 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.15■□□□□ 0.98
Uba3Q8C878 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Uba3Q8C878 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Uba3Q8C878 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.15■□□□□ 0.98
Uba3Q8C878 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uba3Q8C878 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uba3Q8C878 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Uba3Q8C878 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uba3Q8C878 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uba3Q8C878 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC21.15■□□□□ 0.98
Uba3Q8C878 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Uba3Q8C878 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Uba3Q8C878 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Uba3Q8C878 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Uba3Q8C878 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
Uba3Q8C878 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uba3Q8C878 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uba3Q8C878 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Uba3Q8C878 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Uba3Q8C878 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Uba3Q8C878 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Uba3Q8C878 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Uba3Q8C878 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Uba3Q8C878 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Uba3Q8C878 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Uba3Q8C878 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Uba3Q8C878 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Uba3Q8C878 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Uba3Q8C878 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Uba3Q8C878 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Uba3Q8C878 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Uba3Q8C878 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Uba3Q8C878 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Uba3Q8C878 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Uba3Q8C878 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Uba3Q8C878 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Uba3Q8C878 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC21.12■□□□□ 0.97
Uba3Q8C878 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.12■□□□□ 0.97
Uba3Q8C878 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC21.12■□□□□ 0.97
Uba3Q8C878 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.12■□□□□ 0.97
Uba3Q8C878 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
Uba3Q8C878 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Uba3Q8C878 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Uba3Q8C878 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Uba3Q8C878 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 13.8 ms