Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.43■□□□□ 0.86
Rfx6Q8C7R7 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.43■□□□□ 0.86
Rfx6Q8C7R7 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx6Q8C7R7 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx6Q8C7R7 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx6Q8C7R7 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx6Q8C7R7 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx6Q8C7R7 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx6Q8C7R7 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx6Q8C7R7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx6Q8C7R7 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Rfx6Q8C7R7 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Rfx6Q8C7R7 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rfx6Q8C7R7 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfx6Q8C7R7 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Rfx6Q8C7R7 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfx6Q8C7R7 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.42■□□□□ 0.86
Rfx6Q8C7R7 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Rfx6Q8C7R7 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx6Q8C7R7 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx6Q8C7R7 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx6Q8C7R7 Gm13238-201ENSMUST00000117655 780 ntBASIC20.41■□□□□ 0.86
Rfx6Q8C7R7 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.41■□□□□ 0.86
Rfx6Q8C7R7 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx6Q8C7R7 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx6Q8C7R7 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx6Q8C7R7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx6Q8C7R7 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC20.41■□□□□ 0.86
Rfx6Q8C7R7 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx6Q8C7R7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Rfx6Q8C7R7 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx6Q8C7R7 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Rfx6Q8C7R7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx6Q8C7R7 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Rfx6Q8C7R7 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx6Q8C7R7 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Rfx6Q8C7R7 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.4■□□□□ 0.86
Rfx6Q8C7R7 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rfx6Q8C7R7 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Rfx6Q8C7R7 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rfx6Q8C7R7 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rfx6Q8C7R7 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Rfx6Q8C7R7 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Rfx6Q8C7R7 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfx6Q8C7R7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfx6Q8C7R7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Rfx6Q8C7R7 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC20.38■□□□□ 0.85
Rfx6Q8C7R7 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
Rfx6Q8C7R7 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.38■□□□□ 0.85
Rfx6Q8C7R7 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Rfx6Q8C7R7 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.38■□□□□ 0.85
Rfx6Q8C7R7 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfx6Q8C7R7 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfx6Q8C7R7 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Rfx6Q8C7R7 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rfx6Q8C7R7 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rfx6Q8C7R7 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfx6Q8C7R7 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
Rfx6Q8C7R7 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.37■□□□□ 0.85
Rfx6Q8C7R7 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.37■□□□□ 0.85
Rfx6Q8C7R7 Gm43566-201ENSMUST00000196851 808 ntBASIC20.37■□□□□ 0.85
Rfx6Q8C7R7 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfx6Q8C7R7 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfx6Q8C7R7 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfx6Q8C7R7 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Rfx6Q8C7R7 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfx6Q8C7R7 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfx6Q8C7R7 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfx6Q8C7R7 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Rfx6Q8C7R7 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfx6Q8C7R7 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfx6Q8C7R7 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfx6Q8C7R7 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Rfx6Q8C7R7 Gm10399-202ENSMUST00000202768 748 ntBASIC20.36■□□□□ 0.85
Rfx6Q8C7R7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Rfx6Q8C7R7 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Rfx6Q8C7R7 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
Rfx6Q8C7R7 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.36■□□□□ 0.85
Rfx6Q8C7R7 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfx6Q8C7R7 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfx6Q8C7R7 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfx6Q8C7R7 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rfx6Q8C7R7 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Rfx6Q8C7R7 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rfx6Q8C7R7 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Rfx6Q8C7R7 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfx6Q8C7R7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Rfx6Q8C7R7 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfx6Q8C7R7 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfx6Q8C7R7 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfx6Q8C7R7 Iqck-206ENSMUST00000208658 2891 ntBASIC20.34■□□□□ 0.85
Rfx6Q8C7R7 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Rfx6Q8C7R7 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.34■□□□□ 0.85
Rfx6Q8C7R7 Gm5921-201ENSMUST00000075898 882 ntBASIC20.34■□□□□ 0.85
Rfx6Q8C7R7 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rfx6Q8C7R7 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
Rfx6Q8C7R7 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.33■□□□□ 0.85
Rfx6Q8C7R7 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rfx6Q8C7R7 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Rfx6Q8C7R7 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms