Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Eri3Q8C460 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Eri3Q8C460 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Eri3Q8C460 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Eri3Q8C460 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Eri3Q8C460 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Eri3Q8C460 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Eri3Q8C460 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Eri3Q8C460 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Eri3Q8C460 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.12■□□□□ 0.65
Eri3Q8C460 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.12■□□□□ 0.65
Eri3Q8C460 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.12■□□□□ 0.65
Eri3Q8C460 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Eri3Q8C460 Golgb1-201ENSMUST00000023534 498 ntBASIC19.12■□□□□ 0.65
Eri3Q8C460 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Eri3Q8C460 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Eri3Q8C460 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Eri3Q8C460 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Eri3Q8C460 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Eri3Q8C460 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Eri3Q8C460 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
Eri3Q8C460 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.11■□□□□ 0.65
Eri3Q8C460 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Eri3Q8C460 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Eri3Q8C460 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Eri3Q8C460 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Eri3Q8C460 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Eri3Q8C460 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Eri3Q8C460 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Eri3Q8C460 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Eri3Q8C460 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Eri3Q8C460 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Eri3Q8C460 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Eri3Q8C460 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.1■□□□□ 0.65
Eri3Q8C460 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Eri3Q8C460 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Eri3Q8C460 Gm9847-201ENSMUST00000052528 599 ntBASIC19.1■□□□□ 0.65
Eri3Q8C460 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Eri3Q8C460 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Eri3Q8C460 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Eri3Q8C460 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Eri3Q8C460 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Eri3Q8C460 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Eri3Q8C460 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC19.09■□□□□ 0.65
Eri3Q8C460 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Eri3Q8C460 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Eri3Q8C460 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
Eri3Q8C460 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Eri3Q8C460 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.09■□□□□ 0.65
Eri3Q8C460 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Eri3Q8C460 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.08■□□□□ 0.64
Eri3Q8C460 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Eri3Q8C460 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Eri3Q8C460 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
Eri3Q8C460 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Eri3Q8C460 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.08■□□□□ 0.64
Eri3Q8C460 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Eri3Q8C460 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Eri3Q8C460 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Eri3Q8C460 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Eri3Q8C460 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Eri3Q8C460 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.08■□□□□ 0.64
Eri3Q8C460 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.08■□□□□ 0.64
Eri3Q8C460 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Eri3Q8C460 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Eri3Q8C460 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Eri3Q8C460 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.07■□□□□ 0.64
Eri3Q8C460 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Eri3Q8C460 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Eri3Q8C460 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Eri3Q8C460 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.07■□□□□ 0.64
Eri3Q8C460 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Eri3Q8C460 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Eri3Q8C460 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Eri3Q8C460 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Eri3Q8C460 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Eri3Q8C460 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Eri3Q8C460 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Eri3Q8C460 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Eri3Q8C460 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Eri3Q8C460 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Eri3Q8C460 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Eri3Q8C460 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Eri3Q8C460 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
Eri3Q8C460 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Eri3Q8C460 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Eri3Q8C460 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Eri3Q8C460 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Eri3Q8C460 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Eri3Q8C460 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.04■□□□□ 0.64
Eri3Q8C460 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Eri3Q8C460 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Eri3Q8C460 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Eri3Q8C460 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.04■□□□□ 0.64
Eri3Q8C460 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Eri3Q8C460 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Eri3Q8C460 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Eri3Q8C460 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.03■□□□□ 0.64
Eri3Q8C460 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Eri3Q8C460 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms