Protein–RNA interactions for Protein: Q8C2S0

Usp44, Ubiquitin carboxyl-terminal hydrolase 44, mousemouse

Predictions only

Length 711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp44Q8C2S0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
Usp44Q8C2S0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp44Q8C2S0 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp44Q8C2S0 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp44Q8C2S0 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Usp44Q8C2S0 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp44Q8C2S0 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC23.71■■□□□ 1.39
Usp44Q8C2S0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp44Q8C2S0 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp44Q8C2S0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Usp44Q8C2S0 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC23.71■■□□□ 1.39
Usp44Q8C2S0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp44Q8C2S0 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
Usp44Q8C2S0 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
Usp44Q8C2S0 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC23.7■■□□□ 1.38
Usp44Q8C2S0 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
Usp44Q8C2S0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Usp44Q8C2S0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Usp44Q8C2S0 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
Usp44Q8C2S0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
Usp44Q8C2S0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
Usp44Q8C2S0 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Usp44Q8C2S0 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC23.69■■□□□ 1.38
Usp44Q8C2S0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC23.69■■□□□ 1.38
Usp44Q8C2S0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC23.69■■□□□ 1.38
Usp44Q8C2S0 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC23.69■■□□□ 1.38
Usp44Q8C2S0 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Usp44Q8C2S0 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Usp44Q8C2S0 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Usp44Q8C2S0 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
Usp44Q8C2S0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Usp44Q8C2S0 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC23.68■■□□□ 1.38
Usp44Q8C2S0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Usp44Q8C2S0 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Usp44Q8C2S0 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Usp44Q8C2S0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC23.67■■□□□ 1.38
Usp44Q8C2S0 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Usp44Q8C2S0 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC23.67■■□□□ 1.38
Usp44Q8C2S0 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC23.67■■□□□ 1.38
Usp44Q8C2S0 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC23.67■■□□□ 1.38
Usp44Q8C2S0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC23.67■■□□□ 1.38
Usp44Q8C2S0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Usp44Q8C2S0 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Usp44Q8C2S0 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Usp44Q8C2S0 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
Usp44Q8C2S0 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Usp44Q8C2S0 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC23.67■■□□□ 1.38
Usp44Q8C2S0 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
Usp44Q8C2S0 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Usp44Q8C2S0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Usp44Q8C2S0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Usp44Q8C2S0 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Usp44Q8C2S0 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Usp44Q8C2S0 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Usp44Q8C2S0 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Usp44Q8C2S0 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
Usp44Q8C2S0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Usp44Q8C2S0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Usp44Q8C2S0 Gm27045-201ENSMUST00000182145 1402 ntBASIC23.66■■□□□ 1.38
Usp44Q8C2S0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC23.66■■□□□ 1.38
Usp44Q8C2S0 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC23.65■■□□□ 1.38
Usp44Q8C2S0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
Usp44Q8C2S0 Gm9207-201ENSMUST00000198773 1115 ntBASIC23.65■■□□□ 1.38
Usp44Q8C2S0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Usp44Q8C2S0 Gm13241-201ENSMUST00000094493 780 ntBASIC23.65■■□□□ 1.38
Usp44Q8C2S0 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Usp44Q8C2S0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC23.64■■□□□ 1.38
Usp44Q8C2S0 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
Usp44Q8C2S0 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Usp44Q8C2S0 Gm43759-201ENSMUST00000196925 1261 ntBASIC23.64■■□□□ 1.37
Usp44Q8C2S0 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
Usp44Q8C2S0 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Usp44Q8C2S0 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC23.64■■□□□ 1.37
Usp44Q8C2S0 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Usp44Q8C2S0 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Usp44Q8C2S0 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC23.63■■□□□ 1.37
Usp44Q8C2S0 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC23.63■■□□□ 1.37
Usp44Q8C2S0 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC23.63■■□□□ 1.37
Usp44Q8C2S0 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Usp44Q8C2S0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC23.62■■□□□ 1.37
Usp44Q8C2S0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC23.62■■□□□ 1.37
Usp44Q8C2S0 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Usp44Q8C2S0 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
Usp44Q8C2S0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Usp44Q8C2S0 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Usp44Q8C2S0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Usp44Q8C2S0 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC23.61■■□□□ 1.37
Usp44Q8C2S0 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
Usp44Q8C2S0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC23.61■■□□□ 1.37
Usp44Q8C2S0 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Usp44Q8C2S0 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.61■■□□□ 1.37
Usp44Q8C2S0 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Usp44Q8C2S0 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Usp44Q8C2S0 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Usp44Q8C2S0 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Usp44Q8C2S0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC23.6■■□□□ 1.37
Usp44Q8C2S0 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC23.6■■□□□ 1.37
Usp44Q8C2S0 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC23.6■■□□□ 1.37
Usp44Q8C2S0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC23.6■■□□□ 1.37
Usp44Q8C2S0 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC23.6■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms