Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tsen54Q8C2A2 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tsen54Q8C2A2 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tsen54Q8C2A2 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tsen54Q8C2A2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Tsen54Q8C2A2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Tsen54Q8C2A2 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Tsen54Q8C2A2 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tsen54Q8C2A2 Hsf1-204ENSMUST00000226872 2104 ntBASIC16.72■□□□□ 0.27
Tsen54Q8C2A2 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tsen54Q8C2A2 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC16.72■□□□□ 0.27
Tsen54Q8C2A2 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Tsen54Q8C2A2 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tsen54Q8C2A2 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tsen54Q8C2A2 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Tsen54Q8C2A2 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
Tsen54Q8C2A2 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.71■□□□□ 0.27
Tsen54Q8C2A2 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC16.71■□□□□ 0.27
Tsen54Q8C2A2 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tsen54Q8C2A2 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tsen54Q8C2A2 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Tsen54Q8C2A2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
Tsen54Q8C2A2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Tsen54Q8C2A2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Tsen54Q8C2A2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tsen54Q8C2A2 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tsen54Q8C2A2 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC16.7■□□□□ 0.26
Tsen54Q8C2A2 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.7■□□□□ 0.26
Tsen54Q8C2A2 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tsen54Q8C2A2 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tsen54Q8C2A2 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tsen54Q8C2A2 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tsen54Q8C2A2 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tsen54Q8C2A2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Tsen54Q8C2A2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tsen54Q8C2A2 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Tsen54Q8C2A2 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tsen54Q8C2A2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tsen54Q8C2A2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tsen54Q8C2A2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tsen54Q8C2A2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tsen54Q8C2A2 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Tsen54Q8C2A2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tsen54Q8C2A2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tsen54Q8C2A2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Tsen54Q8C2A2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tsen54Q8C2A2 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Tsen54Q8C2A2 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Tsen54Q8C2A2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Tsen54Q8C2A2 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Tsen54Q8C2A2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Tsen54Q8C2A2 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC16.68■□□□□ 0.26
Tsen54Q8C2A2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Tsen54Q8C2A2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tsen54Q8C2A2 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tsen54Q8C2A2 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tsen54Q8C2A2 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tsen54Q8C2A2 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Tsen54Q8C2A2 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tsen54Q8C2A2 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tsen54Q8C2A2 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tsen54Q8C2A2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tsen54Q8C2A2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tsen54Q8C2A2 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tsen54Q8C2A2 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Tsen54Q8C2A2 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tsen54Q8C2A2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Tsen54Q8C2A2 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tsen54Q8C2A2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tsen54Q8C2A2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC16.66■□□□□ 0.26
Tsen54Q8C2A2 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tsen54Q8C2A2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tsen54Q8C2A2 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tsen54Q8C2A2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tsen54Q8C2A2 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tsen54Q8C2A2 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Tsen54Q8C2A2 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Tsen54Q8C2A2 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tsen54Q8C2A2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tsen54Q8C2A2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tsen54Q8C2A2 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tsen54Q8C2A2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tsen54Q8C2A2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Tsen54Q8C2A2 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC16.65■□□□□ 0.26
Tsen54Q8C2A2 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Tsen54Q8C2A2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tsen54Q8C2A2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tsen54Q8C2A2 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Tsen54Q8C2A2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.64■□□□□ 0.25
Tsen54Q8C2A2 Gm5921-201ENSMUST00000075898 882 ntBASIC16.64■□□□□ 0.25
Tsen54Q8C2A2 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Tsen54Q8C2A2 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tsen54Q8C2A2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.63■□□□□ 0.25
Tsen54Q8C2A2 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tsen54Q8C2A2 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tsen54Q8C2A2 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
Tsen54Q8C2A2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC16.63■□□□□ 0.25
Tsen54Q8C2A2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Tsen54Q8C2A2 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Tsen54Q8C2A2 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC16.63■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms