Protein–RNA interactions for Protein: Q8C190

Vps9d1, VPS9 domain-containing protein 1, mousemouse

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps9d1Q8C190 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps9d1Q8C190 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps9d1Q8C190 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps9d1Q8C190 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps9d1Q8C190 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.75■□□□□ 0.59
Vps9d1Q8C190 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC18.75■□□□□ 0.59
Vps9d1Q8C190 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.75■□□□□ 0.59
Vps9d1Q8C190 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps9d1Q8C190 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps9d1Q8C190 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Vps9d1Q8C190 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps9d1Q8C190 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps9d1Q8C190 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Vps9d1Q8C190 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps9d1Q8C190 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps9d1Q8C190 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps9d1Q8C190 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps9d1Q8C190 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.74■□□□□ 0.59
Vps9d1Q8C190 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC18.74■□□□□ 0.59
Vps9d1Q8C190 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Vps9d1Q8C190 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Vps9d1Q8C190 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps9d1Q8C190 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Vps9d1Q8C190 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Vps9d1Q8C190 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps9d1Q8C190 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC18.73■□□□□ 0.59
Vps9d1Q8C190 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps9d1Q8C190 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Vps9d1Q8C190 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps9d1Q8C190 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Vps9d1Q8C190 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Vps9d1Q8C190 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC18.73■□□□□ 0.59
Vps9d1Q8C190 AC093043.1-201ENSMUST00000226700 898 ntBASIC18.73■□□□□ 0.59
Vps9d1Q8C190 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps9d1Q8C190 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Vps9d1Q8C190 Gm15043-201ENSMUST00000118843 1543 ntBASIC18.73■□□□□ 0.59
Vps9d1Q8C190 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps9d1Q8C190 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps9d1Q8C190 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps9d1Q8C190 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps9d1Q8C190 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps9d1Q8C190 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.72■□□□□ 0.59
Vps9d1Q8C190 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps9d1Q8C190 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
Vps9d1Q8C190 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Vps9d1Q8C190 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps9d1Q8C190 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps9d1Q8C190 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Vps9d1Q8C190 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC18.72■□□□□ 0.59
Vps9d1Q8C190 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.72■□□□□ 0.59
Vps9d1Q8C190 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
Vps9d1Q8C190 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Vps9d1Q8C190 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps9d1Q8C190 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps9d1Q8C190 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps9d1Q8C190 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps9d1Q8C190 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Vps9d1Q8C190 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vps9d1Q8C190 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.71■□□□□ 0.59
Vps9d1Q8C190 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Vps9d1Q8C190 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps9d1Q8C190 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Vps9d1Q8C190 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps9d1Q8C190 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps9d1Q8C190 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Vps9d1Q8C190 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vps9d1Q8C190 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Vps9d1Q8C190 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps9d1Q8C190 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Vps9d1Q8C190 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
Vps9d1Q8C190 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Vps9d1Q8C190 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps9d1Q8C190 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vps9d1Q8C190 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC18.7■□□□□ 0.58
Vps9d1Q8C190 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Vps9d1Q8C190 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps9d1Q8C190 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps9d1Q8C190 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps9d1Q8C190 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Vps9d1Q8C190 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps9d1Q8C190 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Vps9d1Q8C190 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps9d1Q8C190 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps9d1Q8C190 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps9d1Q8C190 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps9d1Q8C190 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vps9d1Q8C190 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Vps9d1Q8C190 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Vps9d1Q8C190 Gm16464-201ENSMUST00000117815 1095 ntBASIC18.69■□□□□ 0.58
Vps9d1Q8C190 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps9d1Q8C190 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps9d1Q8C190 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Vps9d1Q8C190 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps9d1Q8C190 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Vps9d1Q8C190 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps9d1Q8C190 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.69■□□□□ 0.58
Vps9d1Q8C190 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Vps9d1Q8C190 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps9d1Q8C190 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Vps9d1Q8C190 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 120.1 ms